Gene Information

Name : SFxv_0532 (SFxv_0532)
Accession : YP_005726150.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : IS2 ORF1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 513613 - 513891 bp
Length : 279 bp
Strand : -
Note : -

DNA sequence :
ATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGG
AAGTCTTACTGCTGTGGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAAC
TCCAGCGCCTGCTCGGCAAGAAAACGATGAAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGG
ATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA

Protein sequence :
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMKNELLKEAVEYGRAKKW
IAHAPLLPGDGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 4e-38 100
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 8e-38 99
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 8e-38 99
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 8e-38 99
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 1e-37 99
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 1e-37 99
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 1e-37 99
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-28 75
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 5e-28 75
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 5e-28 75