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Name : SFxv_4754 (SFxv_4754) Accession : YP_005729947.1 Strain : Shigella flexneri 2002017 Genome accession: NC_017328 Putative virulence/resistance : Unknown Product : IS600 orfB Function : - COG functional category : - COG ID : - EC number : - Position : 4576162 - 4576980 bp Length : 819 bp Strand : - Note : - DNA sequence : ATGTGTCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGGGTACAGCATGAACCCTCAGACAGAAAACAAAGTGA TGAGCGGCTAAAACTGGAGATTAAGGTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGC TGGCAGAGAATGGCATCATCGTTGGTCGTGACCGACTGGCACGTCTTCGTAAGGAGCTGAGGCTACGCTGTAAGCAGAAA CGCAAGTTCAGAGCGACTACGAACCCGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTAC AGCACCAAATCAGGTCTGGGTGGCGGACCTGACGTATGTTGCCACACAGGAGGGATGGTTGTACCTCGCTGGCATCAAAG ATGTTTATACGTGCGAAATTGTCGGCTACGCCATGGGAGAGCGCATGACAAAAGAGCTGACAGGTAAAGCCCTGTTTATG GCGCTCAGGAGCCAGCTCCCACCTGCCGGGCTAATCCACCACTCTGATCGAGGTTCACAGTACTGCGCATACGATTACCG GGTCATACAGGAGCAGTTTGGTCTGAAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCT TCTGGGGAACGCTGAAAAATGAGAGCCTGAGCCACTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGGGAA TACATTGAGATTTTCTACAATCGTCAGCGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATA TCATCAGATGGCTGCTTAA Protein sequence : MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQK RKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM ALRSQLPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIRE YIEIFYNRQRRHSRLGNISPAAFREKYHQMAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 4e-114 | 99 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 3e-114 | 99 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 3e-114 | 99 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 2e-113 | 99 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 9e-113 | 99 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 2e-113 | 99 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 2e-113 | 99 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 1e-113 | 99 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 1e-113 | 99 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 3e-43 | 43 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-43 | 43 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-43 | 43 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 8e-42 | 42 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 1e-41 | 42 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 2e-41 | 42 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 5e-40 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SFxv_4754 | YP_005729947.1 | IS600 orfB | VFG1706 | Protein | 6e-114 | 99 |
| SFxv_4754 | YP_005729947.1 | IS600 orfB | VFG1631 | Protein | 3e-40 | 41 |
