Gene Information

Name : SFxv_4602 (SFxv_4602)
Accession : YP_005729808.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : ISEhe3, transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4434994 - 4435893 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence :
ATGGTAGTGTCCGCTATTGCCAGTACACCTCAGTACGCCTTTATCCGTGACAACTCCTGTTGCTGGCCTGTTCGCCTGCT
CTGTCGGGTGCTGGATGTTCATCCCAGTGGTTTTTACGCCTGGCTTCAGCAGCCGCATTCACAACGCCATCAGGCAGACC
TGAGACTGACAGGACAGATTAAACAGTTCTGGCTGGAATCGGGATGCGTCTATGGTTATCGCAAAATCCATCTGGATCTG
CGTGACAGCGGGCAACAGTGCGGAGTAAACAGAGTCTGGAGACTGATGAAACGTGTCGGAATAAAGGCTCAGGTCGGATA
CCGAAGCCCGCGGGCACGTAAAGGCGAGGCCAGTATCGTGTCACCCAACAGGCTCCAGCGACAGTTCAATCCGGATGCTC
CTGATGAGCGTTGGGTAACGGACATAACCTACATCAGGACCCACGAAGGCTGGCTGTATCTTGCCGTTGTTGTTGATCTG
TTCTCACGCAAAATTATCGGCTGGTCCATGCAATCCCGGATGACAAAGGACATTGTCCTGAACGCACTGCTGATGGCTGT
ATGGCGGCGTAATCCCGAAAAACAGGTGCTGGTTCATTCGGATCAGGGCAGTCAGTACACAAGCCATGAGTGGCAGTCGT
TCCTGAAATCACACGGCCTGGAGGGTAGCATGAGCCGTCGCGGTAACTGCCATGATAATGCGGTTGCAGAAAGTTTTTTC
CAGTTGTTGAAACGTGAACGGATAAAGAAAAAGATCTACGGAACGCGGGAAGAAGCCCGCAGTGATATTTTTGATTACAT
CGAAATGTTTTATAACAGTAAGCGTCGGCATGGTTCTAGCGAACAGATGTCACCGACAGAATATGAAAACCAGTATTATC
AACGGCTCGGAAGTGTCTAG

Protein sequence :
MVVSAIASTPQYAFIRDNSCCWPVRLLCRVLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGYRKIHLDL
RDSGQQCGVNRVWRLMKRVGIKAQVGYRSPRARKGEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDL
FSRKIIGWSMQSRMTKDIVLNALLMAVWRRNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFF
QLLKRERIKKKIYGTREEARSDIFDYIEMFYNSKRRHGSSEQMSPTEYENQYYQRLGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 5e-43 45
tnpB CAB61574.1 transposase B Not tested HPI Protein 8e-44 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 4e-43 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-43 41