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Name : soxS (SFxv_4498) Accession : YP_005729712.1 Strain : Shigella flexneri 2002017 Genome accession: NC_017328 Putative virulence/resistance : Resistance Product : Regulation of superoxide response regulon Function : - COG functional category : - COG ID : - EC number : - Position : 4328761 - 4329084 bp Length : 324 bp Strand : - Note : - DNA sequence : ATGTCCCATCAGAAAATTATTCAGGATCTTATCGCATGGATTGACGTGCATATTGACCAGCCGCTTAACATTGATGTCGT CGCAAAAAAATCAGGCTATTCAAAGTGGTACTTGCAACGGATGTTCCGCACGGTGACGCATCAGACGCTTGGCGATTACA TTCGCCAACGCCGCCTGTTACTGGCCGCCGTTGAGTTGCGCACCACCGAGCGTCCGATTTTTGATATCGCAATGGACCTG GGTTATGTCTCGCAGCAGACCTTCTCCCGCGTTTTCCGTCGGCAGTTTGATCGCACTCCCAGCGATTATCGCCACCGCCT GTAG Protein sequence : MSHQKIIQDLIAWIDVHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDL GYVSQQTFSRVFRRQFDRTPSDYRHRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 9e-45 | 95 |
| tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 2e-21 | 51 |
| tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 2e-21 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | CP000034.1.gene4505. | Protein | 3e-46 | 99 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | BAC0371 | Protein | 2e-46 | 99 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | NC_002695.1.914293.p | Protein | 2e-46 | 99 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | CP001138.1.gene4488. | Protein | 3e-45 | 95 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | CP001918.1.gene327.p | Protein | 2e-43 | 89 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | CP000647.1.gene4499. | Protein | 8e-43 | 88 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | NC_010558.1.6276025. | Protein | 9e-22 | 51 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | CP001138.1.gene612.p | Protein | 2e-23 | 46 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | CP000647.1.gene1624. | Protein | 3e-19 | 43 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | CP001918.1.gene2033. | Protein | 3e-19 | 43 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | NC_002695.1.917339.p | Protein | 5e-19 | 42 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | CP001138.1.gene1637. | Protein | 5e-19 | 42 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | BAC0560 | Protein | 5e-19 | 42 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | CP000034.1.gene1596. | Protein | 4e-19 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | VFG0585 | Protein | 3e-45 | 95 |
| soxS | YP_005729712.1 | Regulation of superoxide response regulon | VFG1038 | Protein | 8e-22 | 51 |
