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Name : SFxv_4142a (SFxv_4142a) Accession : YP_005729392.1 Strain : Shigella flexneri 2002017 Genome accession: NC_017328 Putative virulence/resistance : Resistance Product : trimethoprim resistance protein,type I dihydrofolate reductase Function : - COG functional category : - COG ID : - EC number : - Position : 3946993 - 3947466 bp Length : 474 bp Strand : + Note : - DNA sequence : GTGAAACTATCACTAATGGTAGCTATATCGAAGAATGGAGTTATCGGGAATGGCCCTGATATTCCATGGAGTGCCAAAGG TGAACAGCTCCTGTTTAAAGCTATTACCTATAACCAATGGCTGTTGGTTGGACGCAAGACTTTTGAATCAATGGGAGCAT TACCCAACCGAAAGTATGCGGTCGTAACACGTTCAAGTTTTACATCTGACAATGAGAACGTATTGATCTTTCCATCAATT AAAGATGCTTTAACCAACCTAAAGAAAATAACGGATCATGTCATTGTTTCAGGTGGTGGGGAGATATACAAAAGCCTGAT CGATCAAGTAGATACACTACATATATCTACAATAGACATCGAGCCGGAAGGTGATGTTTACTTTCCTGAAATCCCCAGCA ATTTTAGGCCAGTTTTTACCCAAGACTTCGCCTCTAACATAAATTATAGTTACCAAATCTGGCAAAAGGGTTAA Protein sequence : MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGRKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSI KDALTNLKKITDHVIVSGGGEIYKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dfrA1 | AAX48777.1 | DfrA1 trimethoprim-insensitive dihydrofolate reductase | Not tested | SGI2 | Protein | 2e-69 | 100 |
| dfrI | CAJ77029.1 | dihydrofolate reductase type I | Not tested | AbaR1 | Protein | 2e-69 | 100 |
| dfrA1 | AGF34987.1 | DfrA1 dihydrofolate reductase | Not tested | SGI1 | Protein | 2e-69 | 100 |
| dfrA15 | AGK07099.1 | DfrA15 dihydrofolate reductase | Not tested | SGI1 | Protein | 3e-66 | 92 |
| dfrA1 | ADZ05803.1 | trimethoprim-insensitive dihydrofolate reductase | Not tested | AbaR3 | Protein | 2e-55 | 76 |
| unnamed | AEL12695.1 | DfrA5 | Not tested | AbaR21 | Protein | 2e-55 | 76 |
| dfrA5 | AET25387.1 | dihydrofolate reductase | Not tested | PAGI-2(C) | Protein | 2e-53 | 75 |
| dfrA5 | AFG30110.1 | dihydrofolate reductase | Not tested | PAGI-2 | Protein | 2e-53 | 75 |
