Gene Information

Name : SFxv_4045 (SFxv_4045)
Accession : YP_005729311.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : IS600 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3850819 - 3851772 bp
Length : 954 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGAC
ATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCCCT
GGAGTGAAACAAAGGCAGCTTATCGTTGTTTTTCAAACGATAAAGTCTCTGCTAATAAAATCATGACTCCTCACAAAGAA
AATATCACTGAAAGAGCTCAGCAGTTTAAAAGAGTTTTAGTTTTACAGGATACAACAGAACTTAATTATTCTGGTCAGAA
AGAAAAACAAGGAGTTGGTCCCAAAAAACATAAAGATGAAAGAAACTTATTTCTTCATCCTCAACTCGTCATCAGTGAGT
CAGGTGTTTGCCTCGGTGTTTATGATGACTATCAGTGGTTCAGGGATGAATTAAAAACCAGTAAAAATACCCGACAAGAA
ATCTGCAATGATTTACTTCATAAAAAACATGTCAGTGAAAAAGAAACCTGGCGTTGGGTTGAAGGATATAATAAAGCAAC
AGAACTGGCTCGCCAATGCCCTGATACCCATGTATTGTCAATTTCTGATCGTGAAGGCGATTTTTATGACCTGTTTGAAC
GCGCAGCGCAGACTCCCGGAATAAAAGCTGACTGGCTTGTCAGAATGAAATTTAATAACAGAGCAACGCTGAATATTAAT
GGTAAACGGGATCATAGGTTGTTGCACGAAAGAATCATGGAGATTACACCGCAGCAACTGGTTGAATTCACTATACCTGA
TGGGCGGGGGCAGCAAGCCAGAACACTGCCTGACATGCTTTCATCAGACGCAGGTCCTCTCTCATATCCTCTGATTTACT
CCAGTAAGGTGATGATCATATCTTTATTTGATAGTACGGTAATGCCAGATAAATACAGACACAATGGTAAATAA

Protein sequence : 
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPWSETKAAYRCFSNDKVSANKIMTPHKE
NITERAQQFKRVLVLQDTTELNYSGQKEKQGVGPKKHKDERNLFLHPQLVISESGVCLGVYDDYQWFRDELKTSKNTRQE
ICNDLLHKKHVSEKETWRWVEGYNKATELARQCPDTHVLSISDREGDFYDLFERAAQTPGIKADWLVRMKFNNRATLNIN
GKRDHRLLHERIMEITPQQLVEFTIPDGRGQQARTLPDMLSSDAGPLSYPLIYSSKVMIISLFDSTVMPDKYRHNGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shiE NP_839225.1 hypothetical protein Virulence SHI-2 Protein 9e-150 100
shiE NP_709452.1 hypothetical protein Virulence SHI-2 Protein 6e-149 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_4045 YP_005729311.1 IS600 ORF2 VFG0613 Protein 2e-149 99