Gene Information

Name : SFxv_4032 (SFxv_4032)
Accession : -
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3844544 - 3845192 bp
Length : 649 bp
Strand : -
Note : IS629 ORF2

DNA sequence :
GTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGAC
CATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGGTGG
CTGATTTTACTTACGTCAGCACATGGCGGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATCGTG
GGGGTGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACCGT
CCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGTCTACACACAGCGGCTTAAGGAAGCCGGATTA
CTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGT
AATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGAC
GATTGCTGGAAAGGCTGGGCCACATCCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTG
GCAGCCTGA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 DNA 0.0 100
SF3705 - - Not tested SHI-2 DNA 0.0 100
tnpC AAD44736.1 TnpC Not tested SHI-2 DNA 0.0 99.8
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 DNA 0.0 99.2
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 DNA 0.0 99.2
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 DNA 0.0 99.2
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 DNA 0.0 96.5
IS629 CAC37926.1 transposase for IS629 Not tested LEE DNA e-213 95.8
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE DNA e-213 95.8
IS629 CAI43821.1 transposase for IS629 Not tested LEE DNA e-213 95.8
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 DNA 0.0 95.7
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE DNA 0.0 95.7
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE DNA 0.0 95.7
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE DNA e-217 95.4
unnamed - - Not tested LEE DNA e-208 94.6
ECO103_3580 - - Not tested LEE DNA e-208 94.6
unnamed - - Not tested LEE DNA e-274 94.5
ECO103_3568 - - Not tested LEE DNA e-274 94.5
Z1221 NP_286756.1 transposase Not tested TAI DNA 0.0 94.3
Z1660 NP_287162.1 transposase for IS629 Not tested TAI DNA 0.0 94.3
Z1198 NP_286733.1 transposase Not tested TAI DNA 0.0 94.3
Z1638 NP_287141.1 transposase Not tested TAI DNA 0.0 94.3
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 DNA 0.0 93.8
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 DNA 0.0 93.8
IS629 CAI43840.1 transposase for IS629 Not tested LEE DNA e-208 93.8
ECUMN_3342 - - Not tested Not named DNA e-260 92.7
c3594 NP_755469.1 transposase Not tested PAI I CFT073 DNA e-260 92.7
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 DNA 0.0 92.3