Gene Information

Name : SFxv_4030 (SFxv_4030)
Accession : YP_005729301.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3843461 - 3843760 bp
Length : 300 bp
Strand : -
Note : -

DNA sequence :
ATGACAAAACCAGTATCAATCAGCAAGAAGCCCCGTAAACAACATACGCCTGAATTTCGTAACGAAGCCCTGAAACTCGC
TGAACGCATCGGTGTGGCCGCCGCAGCCCGTGAACTCAGCCTGTATGAATCTCAGCTTTATGCCTGGCGCAGTAAACAGC
AGCAACAAATGAGTTCGTCAGAGCGCGAAAGCGAACTGGCCGCTGAAAATGTCCGCCTTAAACGACAACTGGCGGAGCAG
GCTGAGGAACTGTCCATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA

Protein sequence :
MTKPVSISKKPRKQHTPEFRNEALKLAERIGVAAAARELSLYESQLYAWRSKQQQQMSSSERESELAAENVRLKRQLAEQ
AEELSILQKAATYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 3e-29 100
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 3e-29 100
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 2e-28 98
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 2e-28 98
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 6e-28 82
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 4e-28 82
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 4e-28 82
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 4e-28 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_4030 YP_005729301.1 putative transposase VFG0603 Protein 8e-30 100
SFxv_4030 YP_005729301.1 putative transposase VFG1632 Protein 7e-29 98