Gene Information

Name : SFxv_3835 (SFxv_3835)
Accession : YP_005729122.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : ISSd1, transposase orfA/B, fusion
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3645386 - 3645685 bp
Length : 300 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATAGGTAA

Protein sequence : 
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATAYFAQESLKNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 5e-39 100
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 5e-39 100
unnamed AAF09021.1 unknown Not tested SHI-O Protein 1e-38 99
unnamed AAF09029.1 unknown Not tested SHI-O Protein 1e-38 99
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 8e-39 99
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-38 99
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 1e-33 98
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 1e-33 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3835 YP_005729122.1 ISSd1, transposase orfA/B, fusion VFG1707 Protein 3e-39 99