Gene Information

Name : SFxv_3832 (SFxv_3832)
Accession : YP_005729119.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : Possible chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3642134 - 3642937 bp
Length : 804 bp
Strand : -
Note : -

DNA sequence : 
GTGAACGCGGATTTATCAGTTGTCGAAATGGTTTTTATAATAATGAAAAATTTTAATGTACTAACCAAAGTCGTATTTTG
CTTGTCGTTTTTATCAAGCGCATTTCCCACCTATGCTGCGGATGATGTCAAAGTGACTCAAAACACTTCAGTTTTTAAAC
TGAAGCTTAGTGCAACGCGATTAATCTATGAACAAGGGTCGGATGGCGCAGCGATAACTGTGACAAATCCGCAGGATTGG
CCGATGCTTGTGCAGAGTAAAGTCTTTGAAGAAGATAAAGTAACTGCAGCGCCCTTTATTGTCACTCCGCCACTGTTCAG
GCTTAATCCAGGCCAGCAAAATAAAATGTGGGTTGTGCAGACTGCGCCAGCTTTACAAGACAGGGAAAAATTACACTGGC
TATGCGCCACCGGCATTACGCCTAAAAAGAGTGATGTTTGGGCCGAGAAAGATAAAGAAAAAATTGCTGAAAATGTGAAC
CTGAACATCCAGGTTAACGTACATACCTGCATAAAACTTATTACCAGGCCATCTGGTATTGAAGGCAAGATGGTTAATGC
GAGTGAGAAGTTATCGTGGAAAAAGCAGGGTGATAAAATTGTCGCGGTCAATCAGTCGCCGTTCTACATCAACCTTTCTT
CTTTACAGGTTGGCGGTAGCAAGATTGAGAAACTAGATTATATTGCGCCGTTTTCGCAACATGAGTTTGTTATGCCAAAA
ACTAGCGGCCAGGATATTAAATGGTCTGTGATTACTGATGAAGGTGGTGAGAGTCGTTTGTTTATATCTCATTTGCAATC
ATAA

Protein sequence : 
MNADLSVVEMVFIIMKNFNVLTKVVFCLSFLSSAFPTYAADDVKVTQNTSVFKLKLSATRLIYEQGSDGAAITVTNPQDW
PMLVQSKVFEEDKVTAAPFIVTPPLFRLNPGQQNKMWVVQTAPALQDREKLHWLCATGITPKKSDVWAEKDKEKIAENVN
LNIQVNVHTCIKLITRPSGIEGKMVNASEKLSWKKQGDKIVAVNQSPFYINLSSLQVGGSKIEKLDYIAPFSQHEFVMPK
TSGQDIKWSVITDEGGESRLFISHLQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 1e-47 42
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 1e-47 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3832 YP_005729119.1 Possible chaperone VFG0943 Protein 3e-50 48
SFxv_3832 YP_005729119.1 Possible chaperone VFG0852 Protein 4e-49 46
SFxv_3832 YP_005729119.1 Possible chaperone VFG0850 Protein 2e-50 43
SFxv_3832 YP_005729119.1 Possible chaperone VFG0858 Protein 6e-49 42