|
Name : SFxv_3296 (SFxv_3296) Accession : YP_005728627.1 Strain : Shigella flexneri 2002017 Genome accession: NC_017328 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 3136819 - 3137196 bp Length : 378 bp Strand : + Note : - DNA sequence : ATGAATACATTACCCGACACTCACGTACGGGAGGCATCGGGCTGCCCGTCTCCCATCACCATCTGGCAGACACTGCTCAC CCGACTGCTGGACCAGCACTATGGCCTCACGCTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG AGGCAGGAATTTCACTGTGTGACGCGGTGAACTTTCTCGTTGAAAAATACGCGCTGGTACGTACCGACCAGCCGGGATTC AGCGCAGGAGCCCCGTCGCAGTTAATCAACAGCATTGATATTCTCCGGGCACGCCGGGCAACCGGCCTGATGACCCGCGA TAACTACAGAACGGTAAATAACATTACCCGGGGGAAGCATCCGGAAGCGAAACAATGA Protein sequence : MNTLPDTHVREASGCPSPITIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF SAGAPSQLINSIDILRARRATGLMTRDNYRTVNNITRGKHPEAKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK00482.1 | unknown | Not tested | SHI-1 | Protein | 3e-55 | 100 |
| yeeV | NP_838487.1 | hypothetical protein | Not tested | SHI-1 | Protein | 4e-55 | 100 |
| yeeV | NP_708773.1 | hypothetical protein | Not tested | SHI-1 | Protein | 4e-55 | 100 |
| yeeV | YP_854325.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 4e-54 | 97 |
| yeeV | AAZ04461.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 4e-53 | 97 |
| unnamed | ACU09433.1 | conserved hypothetical protein | Not tested | LEE | Protein | 4e-50 | 94 |
| Z5091 | NP_290242.1 | hypothetical protein | Not tested | LEE | Protein | 5e-50 | 94 |
| ECs4539 | NP_312566.1 | hypothetical protein | Not tested | LEE | Protein | 5e-50 | 94 |
| yeeV | CAE85204.1 | YeeV protein | Not tested | PAI V 536 | Protein | 4e-51 | 94 |
| unnamed | AAC31486.1 | L0007 | Not tested | LEE | Protein | 4e-50 | 94 |
| unnamed | CAD66207.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 1e-50 | 93 |
| ECO103_3592 | YP_003223449.1 | hypothetical protein | Not tested | LEE | Protein | 1e-51 | 93 |
| unnamed | CAD42101.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 3e-50 | 92 |
| z5091 | CAD33789.1 | Z5091 protein | Not tested | PAI I 536 | Protein | 1e-48 | 92 |
| unnamed | AAL67389.1 | L0007-like protein | Not tested | PAI II CFT073 | Protein | 1e-50 | 92 |
| c5149 | NP_756997.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 2e-50 | 92 |
| unnamed | AAL57575.1 | unknown | Not tested | LEE | Protein | 2e-49 | 92 |
| unnamed | CAI43848.1 | hypothetical protein | Not tested | LEE | Protein | 6e-50 | 91 |
| aec76 | AAW51759.1 | Aec76 | Not tested | AGI-3 | Protein | 6e-50 | 91 |
| unnamed | AAL08478.1 | unknown | Not tested | SRL | Protein | 2e-48 | 90 |
| yeeV | ADD91699.1 | YeeV | Not tested | PAI-I AL862 | Protein | 7e-49 | 90 |
| unnamed | AAL67342.1 | intergenic-region protein | Not tested | PAI II CFT073 | Protein | 3e-49 | 89 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SFxv_3296 | YP_005728627.1 | hypothetical protein | VFG0663 | Protein | 1e-55 | 100 |
| SFxv_3296 | YP_005728627.1 | hypothetical protein | VFG0786 | Protein | 2e-50 | 94 |
| SFxv_3296 | YP_005728627.1 | hypothetical protein | VFG1682 | Protein | 4e-51 | 93 |
| SFxv_3296 | YP_005728627.1 | hypothetical protein | VFG1530 | Protein | 5e-49 | 92 |
| SFxv_3296 | YP_005728627.1 | hypothetical protein | VFG1620 | Protein | 1e-50 | 92 |
| SFxv_3296 | YP_005728627.1 | hypothetical protein | VFG1069 | Protein | 8e-49 | 90 |
