Gene Information

Name : SFxv_3279 (SFxv_3279)
Accession : YP_005728612.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3122704 - 3123276 bp
Length : 573 bp
Strand : +
Note : -

DNA sequence : 
ATGCAACAACTTGAAAACAGGTGTGACCTGCTGCTCATCCAGCATCAGAAATGGATGACAAGCGTGACGAGGCTTATCGT
CGCTCATGGAATGGGGTCTCCGCATCTTCATGGTTATCACCGTCTGACCCTGGCACACTTTTTTCTGCCGGAAAAAGGCT
CCGTCATTTCGGTGGCCCCCCAGGGACTCTATCAGGTCGTCAACCCGGGAACACCACCGTTCATTCCTGCCATTCAGGAA
GGGTTAATGACCAGCATTCAGACCCATGAAATCATGCTGCTTACACATTTTAATCTGGGCGGCGTTTTACTCAGTGAGCT
ACATCGTCTGGGTGAAAACCGGCTGGCAAACAGGCTGAACAGCCTGCTCCGGCGTTTCGACGATCGTGATCTCTACCACA
CGCTGATATGGCTGTGCTGGTATGATCTGATGTGTGCCCACTCCATGCAGCCCTGGACTGAAGAGTTAAAGCATAAATCA
CATGCAGAGCTTGAAAACTGGGCTGTGGCGCGCAAACGGGAAAAGCGCGAGCTGGAACTGATGATTGACGAGTACCTGTT
ATACGCCTGCTGA

Protein sequence : 
MQQLENRCDLLLIQHQKWMTSVTRLIVAHGMGSPHLHGYHRLTLAHFFLPEKGSVISVAPQGLYQVVNPGTPPFIPAIQE
GLMTSIQTHEIMLLTHFNLGGVLLSELHRLGENRLANRLNSLLRRFDDRDLYHTLIWLCWYDLMCAHSMQPWTEELKHKS
HAELENWAVARKREKRELELMIDEYLLYAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00471.1 unknown Not tested SHI-1 Protein 3e-72 100
S3191 NP_838474.1 hypothetical protein Not tested SHI-1 Protein 8e-81 100
SF2988 NP_708762.1 hypothetical protein Not tested SHI-1 Protein 8e-81 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3279 YP_005728612.1 hypothetical protein VFG0652 Protein 2e-81 100