Gene Information

Name : SFxv_3268 (SFxv_3268)
Accession : YP_005728604.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3116000 - 3116383 bp
Length : 384 bp
Strand : -
Note : -

DNA sequence : 
ATGTACGCAAAATCTTTTCTCGCACTTGATGGCAACGGACGTCTGACCGGTGCCCGTACCGCACAGACTGCACCTTACGA
TAGCTACACCTGCCACCTTTGCGGCAGTGCACTCAGATACCACCCGCAATACGACACTGAACGGCCCTGGTTTGAACACG
CTGACGAAGGGCTGACGGAGCACGGTCATGAGTGCCCTTATGTCAGGCCGGAACGCAGAGAAATACGGTTGATTAAACGT
CTGCAGCAATTCGTCCCGGATACCTTACCCGTAGTACGTAAAGCCAGCTGGCACTGCAGGCAATGTCACCACGATTATTA
TGGGGAGCAGTACTGCACACACTGCCAGACCGGGCGCTTCAGTGAGGAGGGGGGAGCAGAATGA

Protein sequence : 
MYAKSFLALDGNGRLTGARTAQTAPYDSYTCHLCGSALRYHPQYDTERPWFEHADEGLTEHGHECPYVRPERREIRLIKR
LQQFVPDTLPVVRKASWHCRQCHHDYYGEQYCTHCQTGRFSEEGGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 6e-57 100
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 9e-57 100
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 9e-57 100
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-52 94
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 1e-54 93
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 2e-52 93
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 1e-53 91
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-50 89
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 3e-49 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3268 YP_005728604.1 hypothetical protein VFG0645 Protein 2e-57 100