Gene Information

Name : SFxv_3259 (SFxv_3259)
Accession : YP_005728597.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : IS629 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3111809 - 3112195 bp
Length : 387 bp
Strand : -
Note : -

DNA sequence :
ATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTGTGGGCCCGTCGTCCGTCTGGCACCATCCATCACAGCGA
TAAAGGCTCTCAGTATGTGTCACTGGCCTATAAGGCGCGACTAAAAGAAGCAAAACTGCTGGCATCAACAGGGAGTACTG
GTGACTCGTATGACAACGCGATGGCAGAGATCATCAAGGGCCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAA
AACCGGACAGAAGTGGAGCTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCA
TATCCCACCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAATGATGATCTGGCAGCCTGA

Protein sequence :
METTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYKARLKEAKLLASTGSTGDSYDNAMAEIIKGLYKAEVIHRKSWK
NRTEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r15 AAC61720.1 putative transposase R15 Not tested PAI I CFT073 Protein 2e-50 93
unnamed AAT48693.1 unknown Not tested PAI I 4787 Protein 2e-50 93
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 5e-50 93
CDCE8392_1980 YP_005134511.1 transposase-like protein Not tested Not named Protein 1e-17 49
CDC7B_2058 YP_005163499.1 transposase-like protein Not tested Not named Protein 2e-17 48
CDBH8_0931 YP_005160023.1 transposase-like protein Not tested Not named Protein 3e-11 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3259 YP_005728597.1 IS629 ORF2 VFG1715 Protein 1e-50 93