Gene Information

Name : SFxv_3257 (SFxv_3257)
Accession : YP_005728596.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : Toxin subunit Set1A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3109533 - 3110066 bp
Length : 534 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAGTCAGCGTCTTTCAGCGACAGTGTTTTCATTGTAAACTGACGGTTTTCCCAGTCTTTCTGGTTCAGGCTGACCG
GTGCACTGCCACTGATGGAGGCATGGATAACCGGATGTCCCTGGAATATCAGGGTGCCACTGTCCTGACTCAGGGTACCT
TCCGGCAGGTTCACGCTACCATCAAAGATTACCTTTCTTCCCCCCGGCACCTGTGGAATGGCGACATCCATATTCCCGGT
CAGCTGACCATGAAAGATAACGGGTTGTTTTGCCCGCCCGGCCAGGATCCTATCTTTTACTGTCTGAACTGCTTTGTTTT
TGTTCATGCCAACAAACTCCCACTGAGCCGGATCATTCAGGCTGTTCCCCCACAGAGTGTTACCATAGCTGGCAGATTTC
AGAATATAGAAGCGGGTCTGGCTGTTGAGTATCATGCTGTACAGGTTTCCTGGAGTGCCGGTACCACCAAAGGGGGATAT
ATTTCCAATCGTCGGTTCACTGACATTTGTATCCTGAGCCTTAAGATCCAGTAA

Protein sequence : 
MEVSVFQRQCFHCKLTVFPVFLVQADRCTATDGGMDNRMSLEYQGATVLTQGTFRQVHATIKDYLSSPRHLWNGDIHIPG
QLTMKDNGLFCPPGQDPIFYCLNCFVFVHANKLPLSRIIQAVPPQSVTIAGRFQNIEAGLAVEYHAVQVSWSAGTTKGGY
ISNRRFTDICILSLKIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
set1A AAK00466.1 Shet1A Virulence SHI-1 Protein 5e-82 100
set1A AAB58245.1 enterotoxin 1 Virulence SHI-1 Protein 5e-82 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3257 YP_005728596.1 Toxin subunit Set1A VFG0859 Protein 2e-82 100
SFxv_3257 YP_005728596.1 Toxin subunit Set1A VFG0637 Protein 2e-82 100