Gene Information

Name : SFxv_3256 (SFxv_3256)
Accession : YP_005728595.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : Toxin subunit Set1B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3109344 - 3109529 bp
Length : 186 bp
Strand : +
Note : -

DNA sequence : 
ATGGTTCAGCGTAATATTCCCTTCATACTGGCTCCTGTCATTCACGGTGTCCGGGACAGAGGTACCTTCCTCCGGAATGA
CATAATTTCCTGTTCCGTCATTTTTATCCACAAATGCCCTGTCACTTCCCAGTGTGATATGGCTGTTATCCGACTTAATG
TCACTGTTCAGCGAGGCGTTACGTGA

Protein sequence : 
MVQRNIPFILAPVIHGVRDRGTFLRNDIISCSVIFIHKCPVTSQCDMAVIRLNVTVQRGVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
set1B AAK00465.1 Shet1B Virulence SHI-1 Protein 1e-23 100
set1B AAB58246.1 enterotoxin 1 Virulence SHI-1 Protein 1e-23 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3256 YP_005728595.1 Toxin subunit Set1B VFG0636 Protein 6e-24 100
SFxv_3256 YP_005728595.1 Toxin subunit Set1B VFG0860 Protein 6e-24 100