Gene Information

Name : SFxv_3253 (SFxv_3253)
Accession : YP_005728591.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3105587 - 3106093 bp
Length : 507 bp
Strand : +
Note : -

DNA sequence :
ATGGTGGCCCGGGGATTTACAGGCAGTGAAACCATCGTCAGGGATGCGGTTGCCAAATGGCGTAAAGGCTGGAACCCACC
GGTTACTACTGCCGTCAGACTTCCTTCAGTCTCCCGGGTAAGCCGCTGGTTGATGCCCTGGAGAATAACCAGGGATGAAG
AAAATTATGCTTCCCGATTTATTAGTCTGATGTGTGAAAAAGAACCTGAGCTGAAAATAGCGCAGCAACTGGCACTCGAG
TTCTACCGTATTCTGAAAACCCAAAATAAATCACAGCTAAGCAGTTGGTTCACTCGAGTCCACGAAAGCGGTTCAGCAGA
ATTTCGGCGCGTGGCGGCGGGGATGGAAGCTGATGCTGCAGCTATATGTGAGGCAATCAGTAGTCGCTGGAGTAATGGTG
TTGTCGAAGGTCATGTAAATCGCCTGAAGAAGATGCTGAAACGCCAGATGTATGGTCGAGCAGGATTTGAACTACTCAGG
CAGAGGGTAATGAGTCCACTGGCATGA

Protein sequence :
MVARGFTGSETIVRDAVAKWRKGWNPPVTTAVRLPSVSRVSRWLMPWRITRDEENYASRFISLMCEKEPELKIAQQLALE
FYRILKTQNKSQLSSWFTRVHESGSAEFRRVAAGMEADAAAICEAISSRWSNGVVEGHVNRLKKMLKRQMYGRAGFELLR
QRVMSPLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00462.1 unknown Not tested SHI-1 Protein 6e-75 100
SF2971 NP_708745.1 hypothetical protein Not tested SHI-1 Protein 9e-75 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3253 YP_005728591.1 putative transposase VFG0633 Protein 3e-75 100