Gene Information

Name : SFxv_3252 (SFxv_3252)
Accession : YP_005728590.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3105114 - 3105521 bp
Length : 408 bp
Strand : -
Note : -

DNA sequence :
ATGGTGTCAGCGAAAAACGAAACCGCTGTTGAAATCCCTGGAAAGCTGGTTGCGGAAAAGATGAAGACCCAGTCGCGACA
CTCAGAGTTGGCGAAGGCGTTCGCGTACGCACTTAACCAGTGGCCGGCACTGACGTACTATGCGAACGATGGCTGGGTGG
AAATCGACAACAACATCGCTGAAAATGCCTTGCGGGCGGTCAGTCTGGGTCGTAAAAACTTCCTGTTCTTCGGCTCTGAC
CATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAATGACGTGGATCCAGAAAGCTACCT
TCGCCATGTGCTTGGCGTCATAGCAGACTGGCCGGTCAACCGGGTCAGCGAACTGCTTCCGTGGCGCATAGCACTGCCAG
CTGAATAA

Protein sequence :
MVSAKNETAVEIPGKLVAEKMKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD
HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00461.1 unknown Not tested SHI-1 Protein 1e-49 100
SF2970 NP_708744.1 hypothetical protein Not tested SHI-1 Protein 2e-49 100
unnamed CAD42054.1 hypothetical protein Not tested PAI II 536 Protein 3e-45 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3252 YP_005728590.1 putative transposase VFG0632 Protein 5e-50 100
SFxv_3252 YP_005728590.1 putative transposase VFG1573 Protein 1e-45 99