Gene Information

Name : SFxv_3249 (SFxv_3249)
Accession : YP_005728587.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3099066 - 3099866 bp
Length : 801 bp
Strand : +
Note : -

DNA sequence :
GTGGCGGCCCTTCCCGGTGATCGCCTCTCTGCCGCACTGATGGTTAAATCACACGGCACCGTCAGTGTCGACGGTAAAGT
CTCTGATGCTGACCTCACTTACCTGGAAGAGGTGGCAAACAGCACCGGGCAGGAGGTGGACAAAAGCCGCCTGACATCAC
AGGCCTGTGCCCGCACGGCACTGATCACTGATGTGGGTATTGCTCTGGCTACGGAACTGGAAACGGCCGGGCAGAAATGG
TCTCTGGGCTTCCCCCCCAAATTCCAGCGCGTCGACCTGTTCAACTACAACGTGCTGGTCAGAAATTATGACAGCAGCGC
CTTCAAAGGCGACCGCTACCACAACACGAAAAATGGCATCAACGCCGACATCGGTGCCAGTACGGACCTGGATGACAACT
GGACGCTGGGACTGGTCGCACAGAACCTGATCTCCCGTAGTATTGAGACAAAAGAAGTGAACGGTATCACGGAAACCTTC
AGGATCCGCCCGCAGGTGACGGCCGGTGTCTCCTGGCACAACGCGATGTTCACCACTGCATTTGATGTGGATCTGACCCC
GGCCAGCGGTTTCACCTCCGACAGCAACCGTCAGTTTGCCGCCATTGGCACAGAATTTAATGCCTGGAAATGGGCACAGC
TGCGCGCCGGTTACCGTCAGAATCTGGCCGGTAACGACGGCAGTGCATTCACGGCCGGGGTGGGGATCTCACCGTTTGAT
GTGGTTCACCTTGATGTTGCAGGCCTGATCGGCACGGACAACACTTACGGTGCGGTCGCACAGTTCCAGTTCACCTTCTG
A

Protein sequence :
MAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATELETAGQKW
SLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETF
RIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFD
VVHLDVAGLIGTDNTYGAVAQFQFTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4823 NP_838461.1 hypothetical protein Not tested SHI-1 Protein 2e-112 100
SF2967 NP_708741.2 hypothetical protein Not tested SHI-1 Protein 2e-112 100
unnamed AAK00459.1 unknown Not tested SHI-1 Protein 6e-119 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_3249 YP_005728587.1 hypothetical protein VFG0629 Protein 8e-113 100