Gene Information

Name : SFxv_3229 (SFxv_3229)
Accession : -
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3078350 - 3078918 bp
Length : 569 bp
Strand : -
Note : putative IS3 family transposase

DNA sequence : 
ATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTCG
GATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGG
TAACCTCGCGCATACAACTGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGTGCTAAA
TCACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCT
GGCCACACTGGAGCGTCTTCTGAGTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAA
GGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAA
GGCTGGTACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAA
CACTATCAG

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpH AAD44742.1 TnpH Not tested SHI-2 DNA e-146 99.8
unnamed - - Not tested SHI-2 DNA e-193 99.8
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 DNA e-145 99.6
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 DNA e-136 99.6
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI DNA e-145 99.4
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI DNA e-145 99.4
aec38 AAW51721.1 InsB Not tested AGI-3 DNA e-145 99.3
insB ADD91744.1 transposase Not tested PAI-I AL862 DNA e-117 94.3
unnamed - - Not tested SRL DNA e-160 93.1
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 DNA e-103 91.9
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 DNA e-103 91.9
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 DNA e-103 91.9
unnamed - - Not tested SRL DNA e-150 91.7
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 DNA e-103 91.6
unnamed - - Not tested SRL DNA e-150 91.5
unnamed - - Not tested Tn2411 DNA e-150 91.5