Gene Information

Name : SFxv_1976 (SFxv_1976)
Accession : -
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1859772 - 1860183 bp
Length : 412 bp
Strand : -
Note : IS2 ORF1

DNA sequence :

GTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACG
GCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAAC
ATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTGGCCGCCGGAGAA
CAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGGCTCGGCAAGAAAACGA
TGAAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGG
GATGGGGAGTAA

Protein sequence :

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
S4049	NP_839217.2	insertion sequence 2 OrfA protein	Not tested	SHI-2	DNA	e-205	100
SF3722	NP_709461.3	IS2 ORF1	Not tested	SHI-2	DNA	e-229	99.8
S3188	NP_838471.2	insertion sequence 2 OrfA protein	Not tested	SHI-1	DNA	e-204	99.7
tnpG	AAD44740.1	TnpG	Not tested	SHI-2	DNA	e-204	99.7
unnamed	AAL57520.1	IS2 transposase	Not tested	LEE	DNA	e-202	99.5
S4060	NP_839229.2	insertion sequence 2 OrfA protein	Not tested	SHI-2	DNA	e-202	99.5
aec50	AAW51733.1	Aec50	Not tested	AGI-3	DNA	e-229	99.5
SF2984	NP_708758.3	IS2 ORF1	Not tested	SHI-1	DNA	e-229	99.5
SF3709	NP_709448.3	IS2 ORF1	Not tested	SHI-2	DNA	e-229	99.5
st02	CAC81840.1	ST02 protein	Not tested	LEE II	DNA	e-201	99.2
ECO26_5247	YP_003232129.1	insertion sequence 2 OrfA protein	Not tested	LEE	DNA	e-201	99.2
unnamed	-	-	Not tested	LEE	DNA	e-204	99
insC	YP_002414034.1	IS2 insertion element repressor InsA; KpLE2 phage-like element	Not tested	Not named	DNA	e-191	95.5
unnamed	AAL67376.1	insertion sequence protein	Not tested	PAI II CFT073	DNA	e-165	94.8