Gene Information

Name : SFxv_1888 (SFxv_1888)
Accession : YP_005727366.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : Transposase, IS605 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1768192 - 1768629 bp
Length : 438 bp
Strand : +
Note : -

DNA sequence :
ATGCATGTTCACCTGGTCTTTGTCACCAAATACCGACGCCAGATTTTTGACCATGACACGACAGAAAAACTACGCACTTA
CTTTTCAAATGTATGTGCTGATTTTGCAGCTGAACTGGTTGAAATGGATGGCGAACCAGATCACGTCCATTTGTTAATTA
ACTATCCTCCCAAACTGGCGATATCCAGTCTGGTAAACAGCCTCAAAGGCATATCGAATAGGTTACTGCGACGAGATCGA
CCAGATATTGCAGTCAGGTATTACTACAAAGGCGTTTTGTGGAGTCCTGGCTATTTTGCCAGTAGCTGCGAAGGTGCGCC
AATATCCGTCATCCGCCAGTACATTGAACAACAGCAAACACCTGGTCAGGTGGAAAACCGCGCCTTATATCCCCGCCCTG
AAGGACGAGGTTTTACGGCGCACCGGATAAAGGACTGA

Protein sequence :
MHVHLVFVTKYRRQIFDHDTTEKLRTYFSNVCADFAAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGISNRLLRRDR
PDIAVRYYYKGVLWSPGYFASSCEGAPISVIRQYIEQQQTPGQVENRALYPRPEGRGFTAHRIKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAR03856.1 transposase A-like protien Not tested cag PAI Protein 3e-32 58
tnpB CAJ31328.1 insertion sequence IS606 transposase homolog B Not tested cag PAI Protein 4e-31 56