Gene Information

Name : marA (SFxv_1753)
Accession : YP_005727252.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Resistance
Product : Multiple antibiotic resistance protein marA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1651047 - 1651490 bp
Length : 444 bp
Strand : -
Note : -

DNA sequence : 
TTGCAACACTTGAGCATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGA
CGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGC
GTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGTCATTCATTAGGCCAATACATCCGCAGC
CGTAAGATGACGGAAATCGCGCAAAAGCTGAAGGAAAGTAACGAGCCGATACTCTATCTGGCAGAACGATATGGCTTCGA
GTCGCAACAAACTCTGACCCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGG
GCGAATCGCGCTTTTTACATCCATTAAATCATTACAACAGCTAG

Protein sequence : 
MQHLSICLRKSCRKQKRGMTMSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS
RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLHPLNHYNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 3e-21 43
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 3e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
marA YP_005727252.1 Multiple antibiotic resistance protein marA BAC0560 Protein 5e-57 100
marA YP_005727252.1 Multiple antibiotic resistance protein marA NC_002695.1.917339.p Protein 5e-57 100
marA YP_005727252.1 Multiple antibiotic resistance protein marA CP000034.1.gene1596. Protein 7e-58 99
marA YP_005727252.1 Multiple antibiotic resistance protein marA CP001138.1.gene1637. Protein 1e-53 96
marA YP_005727252.1 Multiple antibiotic resistance protein marA CP001918.1.gene2033. Protein 3e-52 94
marA YP_005727252.1 Multiple antibiotic resistance protein marA CP000647.1.gene1624. Protein 8e-53 93
marA YP_005727252.1 Multiple antibiotic resistance protein marA CP001138.1.gene612.p Protein 1e-22 43
marA YP_005727252.1 Multiple antibiotic resistance protein marA NC_010558.1.6276025. Protein 1e-21 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
marA YP_005727252.1 Multiple antibiotic resistance protein marA VFG1038 Protein 1e-21 43