Gene Information

Name : SFxv_1726 (SFxv_1726)
Accession : YP_005727224.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : IS1 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1629644 - 1630201 bp
Length : 558 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGTGCTAAAT
CACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGGGAACGCACTCTG
GCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGTCCGCTGTATGA
ATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGAC
AACATCTGGCAAGGCTGGTACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTAT
CTGAACATAAAAACACTATCAGTAAGTTGGAGTCATTACCAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGA

Protein sequence : 
MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHDKVIGHY
LNIKTLSVSWSHYQKKQQRILHRSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 2e-63 99
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-64 99
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-64 99
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 2e-63 99
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 1e-50 99
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 3e-64 98
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 2e-59 92
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 2e-59 88
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 2e-59 88
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 2e-59 88
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 9e-59 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_1726 YP_005727224.1 IS1 ORF2 VFG0612 Protein 1e-64 98