Gene Information

Name : SFxv_1338 (SFxv_1338)
Accession : YP_005726867.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Unknown
Product : Transposase insE for insertion sequence IS3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1266866 - 1267174 bp
Length : 309 bp
Strand : +
Note : -

DNA sequence :
GTGACTTACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCT
GAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAGCTCTACAACTGGCGCA
GTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTG
GCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA

Protein sequence :
MTYMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQL
AERDEELAILQKAATYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 3e-39 100
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 2e-39 100
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 2e-39 100
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 2e-39 100
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 2e-30 82
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 8e-30 82
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 8e-30 82
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 2e-30 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_1338 YP_005726867.1 Transposase insE for insertion sequence IS3 VFG1632 Protein 3e-30 82
SFxv_1338 YP_005726867.1 Transposase insE for insertion sequence IS3 VFG0603 Protein 6e-31 82