Gene Information

Name : SFxv_1165 (SFxv_1165)
Accession : YP_005726714.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1126828 - 1127319 bp
Length : 492 bp
Strand : +
Note : -

DNA sequence :
ATGATGAAACTGGCCCTGACACTGGAAGCCGACAGCGTTAACGTACAGGCACTGAACATAGGGCGCATTGTCGTTGACGT
CGATGGTATTGAGCTCGCTGAACTGATTAACATGGTCTGCGATAACGGCTACTCCCTTCGTGTTGTTGATGAATCTGACC
AGACCTCAGCAGAATGCACGCCACCATTTGCTACCCTTACCGGCATACGCTGCAGTACCGCACATATCACGGAAACGGAC
AACGCCTGGTTGTACTCGCTGTCACACCAGACCAGTGACTTCGGTGAATCAGAATGGATTCATTTTACAGGTAGCGGATA
TCTGTTACGTACCGATGCGTGGTCATACCCGGTTCTGCGGCTTAAACGCCTGGGGCTGTCAAAAACGTTCCGTCGTCTGG
TCGTCACACTCATCCGGCGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGCCTGCCGGGTTTACCCACT
TTCGACTGGTAA

Protein sequence :
MMKLALTLEADSVNVQALNIGRIVVDVDGIELAELINMVCDNGYSLRVVDESDQTSAECTPPFATLTGIRCSTAHITETD
NAWLYSLSHQTSDFGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLIRRYGVSLIHLDASAECLPGLPT
FDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08479.1 unknown Not tested SRL Protein 2e-71 99
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 1e-71 99
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 1e-71 99
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 3e-70 94
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 4e-70 94
unnamed AAC31487.1 L0008 Not tested LEE Protein 3e-70 94
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 4e-70 94
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 3e-66 93
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 1e-65 91
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 8e-65 90
unnamed AAL57574.1 unknown Not tested LEE Protein 8e-59 90
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 4e-64 89
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-64 89
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 5e-64 88
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 4e-65 88
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 6e-64 87
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 3e-61 86
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-60 86
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 6e-62 86
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 6e-62 86
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-61 86
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 6e-62 85
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 5e-55 84
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 2e-53 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_1165 YP_005726714.1 hypothetical protein VFG1070 Protein 8e-72 99
SFxv_1165 YP_005726714.1 hypothetical protein VFG0787 Protein 1e-70 94
SFxv_1165 YP_005726714.1 hypothetical protein VFG1621 Protein 1e-66 93
SFxv_1165 YP_005726714.1 hypothetical protein VFG1531 Protein 2e-64 88
SFxv_1165 YP_005726714.1 hypothetical protein VFG1683 Protein 2e-65 88
SFxv_1165 YP_005726714.1 hypothetical protein VFG0664 Protein 2e-62 86