Name : SFxv_1154a (SFxv_1154a) Accession : YP_005726705.1 Strain : Shigella flexneri 2002017 Genome accession: NC_017328 Putative virulence/resistance : Resistance Product : putative transcriptional regulator TetD Function : - COG functional category : - COG ID : - EC number : - Position : 1121450 - 1121866 bp Length : 417 bp Strand : + Note : - DNA sequence : ATGTATATTGAACAGCATTCTCGCTATCAAAATAAAGCTAATAACATCCAATTAAGATATGATGATAAGCAGTTTCATAC AACGGTTATCAAAGATGTTCTATTATGGATTGAACATAATTTAGATCAGTCTTTACTGCTTGATGATGTGGCGAATAAAG CGGGTTATACCAAGTGGTATTTTCAGCGGCTGTTCAAAAAAGTAACAGGGGTCACACTGGCTAGCTATATTCGTGCTCGT CGTTTGACGAAAGCGGCTGTTGAGTTGAGGTTGACGAAAAAAACTATCCTTGAGATCGCATTAAAATATCAATTTGATTC CCAACAATCTTTTACACGTCGATTTAAGTACATTTTTAAGGTTACACCAAGTTATTATCGGCGTAATAAATTATGGGAAT TGGAGGCAATGCACTGA Protein sequence : MYIEQHSRYQNKANNIQLRYDDKQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTLASYIRAR RLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYRRNKLWELEAMH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 1e-59 | 100 |
tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 1e-59 | 100 |
soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 6e-21 | 50 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | NC_010558.1.6276025. | Protein | 5e-60 | 100 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | BAC0371 | Protein | 4e-22 | 51 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | CP000034.1.gene4505. | Protein | 8e-22 | 51 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | NC_002695.1.914293.p | Protein | 4e-22 | 51 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | CP001138.1.gene4488. | Protein | 2e-21 | 50 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | CP001138.1.gene612.p | Protein | 8e-22 | 48 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | CP001918.1.gene327.p | Protein | 3e-20 | 47 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | CP000647.1.gene4499. | Protein | 3e-20 | 47 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | CP000647.1.gene1624. | Protein | 1e-21 | 47 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | CP001918.1.gene2033. | Protein | 4e-21 | 45 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | CP001138.1.gene1637. | Protein | 3e-21 | 43 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | NC_002695.1.917339.p | Protein | 2e-21 | 43 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | BAC0560 | Protein | 2e-21 | 43 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | CP000034.1.gene1596. | Protein | 1e-21 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | VFG1038 | Protein | 4e-60 | 100 |
SFxv_1154a | YP_005726705.1 | putative transcriptional regulator TetD | VFG0585 | Protein | 2e-21 | 50 |