Gene Information

Name : SFxv_1139 (SFxv_1139)
Accession : YP_005726690.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Resistance
Product : Transposon Tn10 tetC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1105352 - 1105945 bp
Length : 594 bp
Strand : +
Note : -

DNA sequence :

ATGGAAAATAAAAATCATCAACAAGAAAATTTTAAGAGTACCTATCAATCACTGGTTAACTCAGCACGAATATTGTTTGT
TGAAAAAGGCTATCAAGCTGTTTCAATAGATGAGATCTCGGGAAAAGCGTTGGTGACCAAAGGTGCCTTTTATCATCACT
TTAAAAATAAAAAACAATTACTCAGTGCCTGTTATAAGCAGCAATTAATTATGATTGATGCCTACATCACAACAAAAACT
GATTTAACAAATGGTTGGTCTGCCTTAGAAAGTATATTTGAACATTATCTTGATTATATTATTGATAATAATAAAAACCT
TATCCCTATCCAAGAAGTGATGCCTATCATTGGTTGGAATGAACTTGAAAAAATTAGCCTTGAATACATTACTGGTAAGG
TAAACGCCATTGTCAGCAAATTGATCCAAGAGAACCAACTTAAAGCTTATGATGATGATGTGCTTAAAAACTTACTCAAT
GGCTGGTTTATGCATATCGCAATACATGCGAAAAACCTAAAAGAGCTTGCCGATAAAAAAGGCCAATTTATTGCTATTTA
CCGCGGCTTTTTATTGAGCTTGAAAGATAAATAA

Protein sequence :

MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKALVTKGAFYHHFKNKKQLLSACYKQQLIMIDAYITTKT
DLTNGWSALESIFEHYLDYIIDNNKNLIPIQEVMPIIGWNELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLN
GWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
tetC	AAL08446.1	putative transcriptional regulator TetC	Not tested	SRL	Protein	3e-87	100
tetC	AEA34666.1	tetracycline resistance protein C	Not tested	Not named	Protein	3e-87	100

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SFxv_1139	YP_005726690.1	Transposon Tn10 tetC protein	NC_010558.1.6275977.	Protein	1e-87	100

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SFxv_1139	YP_005726690.1	Transposon Tn10 tetC protein	VFG1037	Protein	1e-87	100