Gene Information

Name : SFxv_1117 (SFxv_1117)
Accession : YP_005726667.1
Strain : Shigella flexneri 2002017
Genome accession: NC_017328
Putative virulence/resistance : Virulence
Product : CP4-57 prophage hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1084079 - 1085461 bp
Length : 1383 bp
Strand : -
Note : -

DNA sequence :
ATGATGACGACAAAACTATCACTCCCTGAACTTGACACAACTAAACTGCCTGACAGGTGCCAGGCATTACTTGATGAAAT
GCATGAAGAAACAGGAATACGCCGTGAAATACTTCTGTCTGTTATGCTGACGGTCATGGCTGCCTCGGTCCAGGATACGC
ATGAAGTTGAACTTTCCGGAGGGCAACGTACCAGCCTTCAGATATTTATGTGTCTTTCATCAGCATCAGGCAGTGGAAAA
ACCTCTGCCTGCGCAAAATTAATCGCTCCTGTTCATGAAACAGAAGAAGAACTACATCAGGCATATATCGACGATAAAAA
AAACTATGACCGAATGATGGAAATGTGGACAACAGATAAAAAAATCCTGGAGCGGAGATATAAAAAGGAAATTGAAAGAT
CCCCGGAAAATGCTGCTGCTGCACGAGCAGCACTTGAAAAGTGTATAGCAAATAAACCCGAACCTCCCGTACAACAGGTT
CTCATCGTGAATGACGCGACACCAGAAGGGATAGCTTTGAAACTCAGCCAGTCACCCTCTCTTCTGTTGCTGTCTGATGA
AGGAGGTACTATTCTGGATAAGCGTTTCGAACGCAAATCGGCACTGTACAACACATTATGGAGTGGGCAACCAGTCAACG
TTGAACGGGCATCCAGACCCGGGTTCCGGCTGAATGATGTCCGTCTCACTATACTTATACTGACTCAACCGGTAATATTT
AATAAGTTTTTTACTCTCACTGGCGATCAGATCCGGGGCAATGGCTTTCTGGCCCGGTTGCTATTTTGCGAACCCGGAGC
AATTAAAATAATGACGACAGAACCGCATACTGCCACTCCTGTTGTGACGCAACAATGTGCAAGCTGTTTTCGTAAGAAAA
GTTTTGGCAGTCAGATCAGAGACTCTCTGAGAGCATCCAGAGAAAGACGTGCAAAAAGTAAAGAGCGCATCTGCATGACA
TTATCAAATGCAGCATCCCGCGCACTGGAGCGCTTTCACAAAGAAAATATGGATACTGTCAGACAGAATCCTCATATGGG
TACATTTGAAGACATTATTGTCAGAAAAAGAGAGCAGGTTGTCAGGATAGCAGCACTTCTGGAACTGGAGAAAGATCCAG
ACTCGACAGTAATAACGCTGGAAAGTACTAATAGCGCCATTTATCTCATTGAATTTTATTTCAAGCATCTTATATATAAA
CTTGAATCCCTTCGGGAATATCCCCGGCTGAGAAACTTGATAAATGGCTTCAGAAAAGAATTATCACAACAGCAGGTTAC
ATATTCCAGAAAAGTTATATTTTACAATATGCCCCATATGCTCTCAGGAAAAAATGTGTTCTGGATGAAGCACTTGACAT
ACTGGCGGAACAAAGGAAAATAA

Protein sequence :
MMTTKLSLPELDTTKLPDRCQALLDEMHEETGIRREILLSVMLTVMAASVQDTHEVELSGGQRTSLQIFMCLSSASGSGK
TSACAKLIAPVHETEEELHQAYIDDKKNYDRMMEMWTTDKKILERRYKKEIERSPENAAAARAALEKCIANKPEPPVQQV
LIVNDATPEGIALKLSQSPSLLLLSDEGGTILDKRFERKSALYNTLWSGQPVNVERASRPGFRLNDVRLTILILTQPVIF
NKFFTLTGDQIRGNGFLARLLFCEPGAIKIMTTEPHTATPVVTQQCASCFRKKSFGSQIRDSLRASRERRAKSKERICMT
LSNAASRALERFHKENMDTVRQNPHMGTFEDIIVRKREQVVRIAALLELEKDPDSTVITLESTNSAIYLIEFYFKHLIYK
LESLREYPRLRNLINGFRKELSQQQVTYSRKVIFYNMPHMLSGKNVFWMKHLTYWRNKGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08427.1 unknown Not tested SRL Protein 1e-178 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_1117 YP_005726667.1 CP4-57 prophage hypothetical protein VFG1018 Protein 7e-179 100