Gene Information

Name : virB4-1 (SM11_pC0943)
Accession : YP_005724825.1
Strain :
Genome accession: NC_017327
Putative virulence/resistance : Virulence
Product : VirB4 type IV secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 862829 - 865207 bp
Length : 2379 bp
Strand : +
Note : -

DNA sequence :
TTGCCTAGCCTGACCACACTCAGATCTCGCGAACTCGGTCCGGAGACCTTCATCCCCTATGTCCGCCATGTCGACGAGTC
GACAATCGCGCTCGATTCCCGGGCGCTGATGGTGATGATCGCGCTCGAAGGCGTCTCCTTCGAGACCGCCGATATTCTCG
ACCTGAATGCCCTCCATCGCGACCTCAACACCCTCTACCGCAACATCGCCGACGAGCGGCTTGCCTTGTGGACGCATCTC
ATCCGCCGTCGCGACAACAGCTATCCAGAAGGCACGTTCGCCACACCGTTCTCGGCAGCGCTCAACGATAAGTACCGCGA
AAGAATGGTGGGCGAGGACCTGTTTCGCAACGACCTCTATCTGTCAATTCTCTGGTCACCAGCTCGCGATCCGGCAGACA
AGGCGGCAAAACTGCTGTCGCGCCTGCGTCGGGCCCGCCGGGTCGGGACCGAACTCGATGAGGACGCCCTCAAGCATCTC
CGCGACAAGGTCATCGACGTCACCGCCGCTTTGAGACGCTTCGAGCCGCGCGTGTTGACCCTCTACGAGCACGACGGCCT
CATGTTCTCGGAACCGAGCGAGGTGCTCCATCAGCTCGTCGGCGGCCGTCGCGAGCCGATCCCGCTGACAGAGGGGCACA
TCGCCTCTGCCATCTACTCGGATCGCGTCATCGTGGGGCGCGAGACGATTGAGATCCGGCACGAGGCGGACAGCCGTTAT
GCCGGCATGCTGAGCTTCAAGGAGTATCCGGCCCGCACCAGGACCGGCATGCTTGATGCCGTGCTCACCAGCCCGTTTGA
ACTCATTCTGGCGCAATCCTTCTCTTTCGTCTCGAAGGCCGACGCGCGCGTGATCATGGGCCGCAAGCAAAACCAGATGG
TCAGCAGCGGCGACAAGGCGGCCTCGCAGATCGAGGAACTTGATGGGGCGATGGACGATCTGGAGTCCAACCGGTTCGTG
TTCGGCGAGCACCACCTGACGCTTTCCGTCTTTGCCCCCTCAGTGAAGGAACTGACCGACAATCTTGCCAAGGCACGCGC
CAGCATGACCAGTGGCGGCGCAGTCGTCGCGCGTGAGGATCTCGGCCTTGAGGCGGCCTGGTGGGCGCAGCTACCGGGCA
ACTTCCGTTATAGGGCCCGGTCCGGCGCGATCACGTCACGGAACTTCGCAGCGCTGTCGCCCTTCCACTCTTATCCGCTC
GGCCAAAGGGACGGTAACGAGTGGGGACCCGCCGTCGCCCTGCTCAAGACCGCGTCCGGCTCGCCGTACTACTTCAACTT
CCATTACGGCGATCTCGGCAACACCTTCGTCTGCGGGCCGTCCGGCGCCGGCAAAACGGTGCTGCTCAACTTCATGCTGT
CGCAACTAGAAAAGCATGATCCGCATGTGGTGTTCTTCGATAAGGACAGGGGAGCCGATCTCTACGTGCGCGCCGCCGGC
GGCACCTATCTGCCTCTCAAGAACGGCATCCCGACCGGTTGCACCCCCTTAAAGGCCCTCCAATTGACGCCGGAGAACAA
GGTCTTTCTGACACGCTGGGTCGGCAAGCTGGTCGGCTCGGCAACGCGTGAACTGAGCGTGACCGAACTCCGCGACATTG
CGTCCGCAATCGACGGCCTTGCCGACCTGCCGGTCGAGCGTCGGACGATCGGCGCGCTCAGGACCTTTCTCGACAACACG
AACCCGGAAGGGATCGCAGCCAGGCTGCGGCGGTGGGAGAGGGGAGGGCCGCTCGGCTGGGTCTTTGACAACGTCATCGA
GGATATCGGTTTCGGAGAATCCGGCGGTGGCAAGTTCGTCGGCTACGACATGACCGACTTTCTCGACAACGAGGAAATCC
GGACCCCCCTGATGGCCTATCTCTTCCATCGTGTCGAGCAACTGATCGACGGCCGCAGGATCATCATCGTTATCGACGAG
TTCTGGAAAGTGCTCCAGGACGAAGGGTTCCGCGATCTCGCGCAGAACAAGCTCAAGACGATCCGCAAGCAGAACGGCCT
CATGCTGTTTGCGACACAGAGCCCGCGCGACGCGATCGTCTCGCCGATCGCTCACACCATCATCGAGCAATGCCCGACAC
AGATCTTCCTGCCGAACTCCCGCGGCAATCATGGCGACTATGTCGATGGCTTCAAGCTGACGGAGCGCGAATTCGAGCTG
GTCGCGCGTGAGCTCTCCATCGAGAGCCGGCGGTTCGTGTTGAAGCAGGGACATAACAGCGTCGTCGCCGAGCTGGATCT
CAAGGGCCTCGACGACGAACTCGCCATCCTCTCCGGACGAACCGCCAATGTCGAACTTGCCGATGCGATCCGTGCGGAGG
TCGGCAGCAATGCAAAGGATTGGCTTCCCGTTTTCCAGCAAAGAAGGAGTGCGACCTAA

Protein sequence :
MPSLTTLRSRELGPETFIPYVRHVDESTIALDSRALMVMIALEGVSFETADILDLNALHRDLNTLYRNIADERLALWTHL
IRRRDNSYPEGTFATPFSAALNDKYRERMVGEDLFRNDLYLSILWSPARDPADKAAKLLSRLRRARRVGTELDEDALKHL
RDKVIDVTAALRRFEPRVLTLYEHDGLMFSEPSEVLHQLVGGRREPIPLTEGHIASAIYSDRVIVGRETIEIRHEADSRY
AGMLSFKEYPARTRTGMLDAVLTSPFELILAQSFSFVSKADARVIMGRKQNQMVSSGDKAASQIEELDGAMDDLESNRFV
FGEHHLTLSVFAPSVKELTDNLAKARASMTSGGAVVAREDLGLEAAWWAQLPGNFRYRARSGAITSRNFAALSPFHSYPL
GQRDGNEWGPAVALLKTASGSPYYFNFHYGDLGNTFVCGPSGAGKTVLLNFMLSQLEKHDPHVVFFDKDRGADLYVRAAG
GTYLPLKNGIPTGCTPLKALQLTPENKVFLTRWVGKLVGSATRELSVTELRDIASAIDGLADLPVERRTIGALRTFLDNT
NPEGIAARLRRWERGGPLGWVFDNVIEDIGFGESGGGKFVGYDMTDFLDNEEIRTPLMAYLFHRVEQLIDGRRIIIVIDE
FWKVLQDEGFRDLAQNKLKTIRKQNGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFLPNSRGNHGDYVDGFKLTEREFEL
VARELSIESRRFVLKQGHNSVVAELDLKGLDDELAILSGRTANVELADAIRAEVGSNAKDWLPVFQQRRSAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB4 YP_001610000.1 VirB4 protein Virulence Not named Protein 0.0 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB4-1 YP_005724825.1 VirB4 type IV secretion protein VFG2233 Protein 0.0 62