Gene Information

Name : SM11_pC0686 (SM11_pC0686)
Accession : YP_005724568.1
Strain :
Genome accession: NC_017327
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 598955 - 599797 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGACCATCTGCTCGTCGCCAGCGGATTGACGGCCGGTTATGACAAAACCGAAATCCTGCATGCGCTCGACCTCAC
CATTCCCCCGCGCAAAATCACGGTGATCGTCGGCGCCAATGCCTGTGGCAAGTCCACGTTTCTCCGCACGCTCTCGCGGT
TAATCGCGCCCAGCAAGGGGCAAGTTCTCCTCGACGGCAAATCCATCCACCGGACACCCTCGCGAGATCTCGCCCGGACG
CTGGGTCTGTTGCCGCAATCGCCGATCGCGCCGGAAGGCATCACAGTGGTCGACCTCGTCAGCAGGGGACGGCATCCGCA
TCAAAGCCTGTTTTCCGGCTGGACGCGACGGGACGACGAGGCGGTCGACAGTGCGCTTAGGGCGACAAAGACATTCGACC
TTGCCGATCGGCCGATCGACGAGCTCTCCGGCGGCCAGCGGCAGCGGGTCTGGATCGCCATGGCACTCGCCCAGCAAACC
GACATCCTGCTGCTCGACGAGCCGACGAGCTTTCTCGACATCAACCATCAGATCGAGGTGCTCGATCTCCTGACCGATCT
CAACAGCGCGCGTCGAACTACGGTCGTCATGGTGCTGCACGATCTCAACCTTGCTGCCCGCTACGCCGACCATCTCGTGG
CGATTGCCGGTGGGCGCGTGCACATTTCGGGCACTCCGGAAGAGGTGCTCACCGAAGAGACCGTGCGGCATGTTTTCGGC
CTTGATAGTCGCGTCATCAGCGATCCCACGTCGGGTCGGCCAATCATGCTACCGATCGGGCGACACCGGATGGCCGTCAT
CGACGACATGGGCGATGCACCACAAAAGGAGAGGAGCGCATGA

Protein sequence : 
MTDHLLVASGLTAGYDKTEILHALDLTIPPRKITVIVGANACGKSTFLRTLSRLIAPSKGQVLLDGKSIHRTPSRDLART
LGLLPQSPIAPEGITVVDLVSRGRHPHQSLFSGWTRRDDEAVDSALRATKTFDLADRPIDELSGGQRQRVWIAMALAQQT
DILLLDEPTSFLDINHQIEVLDLLTDLNSARRTTVVMVLHDLNLAARYADHLVAIAGGRVHISGTPEEVLTEETVRHVFG
LDSRVISDPTSGRPIMLPIGRHRMAVIDDMGDAPQKERSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-69 54
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-69 54
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-65 54
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-53 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-52 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-52 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-52 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-52 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM11_pC0686 YP_005724568.1 ABC transporter ATP-binding protein BAC0164 Protein 8e-54 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM11_pC0686 YP_005724568.1 ABC transporter ATP-binding protein VFG0925 Protein 4e-66 50
SM11_pC0686 YP_005724568.1 ABC transporter ATP-binding protein VFG1042 Protein 7e-54 48