Gene Information

Name : gabD5 (SM11_pC0616)
Accession : YP_005724498.1
Strain :
Genome accession: NC_017327
Putative virulence/resistance : Unknown
Product : GabD5 succinate semialdehyde dehdyrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 537013 - 538467 bp
Length : 1455 bp
Strand : -
Note : -

DNA sequence :
ATGAGATTGAAGGACAAGGAACTCTTCCGGCAATTGGGCCTGATCGGCGGTGAGTGGATCGCCGGAGCTTCGGGCGAGGT
CGTCGACGTCATCGATCCTGCGAACCAGGCCGTTCTCGGCACCGTGCCCGACATGGGAACGGCCGAAACCCGCGCGGCCA
TCGAAGCGGCCAATGCCTCCTTCGGACCTTGGAAGAAGAAAACCCACGCCGAACGCGCCGCCGTGCTCGAGCGCTGGCAC
GCGCTGATGATCGAAAACCTCGAAGATCTGGCGGTGCTCGTGACGATGGAACAGGGCAAGCCGCTCGAGGAGGCGCGTGG
CGAGATCCGCTACGGCGCCGCCTTTGTCAAATGGTTCGCGGAAGAATCCCGCCGCATCGGCGGCCACACCATTCCCTCCC
CGACGTCGGACCGCCGCATCGTCGTGCTGAAGGAAGCGGTCGGCGTCTGCGCCATCGTCACGCCGTGGAATTTCCCCAAC
GCGATGATCACCCGGAAGGTCGCCCCGGCGCTCGCCGCCGGCTGCACGGTGGTCATCAAGCCCTCGGAGTTCACGCCCTT
CTCGGCGCTCGCCCTCGGCGTGCTCGCCGAGCGCGCCGGCATTCCGGCCGGCGTCGTCAATATCGTCACGGGCATGCCGA
CGGCGATCGGTAACGAGTTCATGACGAACGAGACGGTACGCAAGATCTCCTTCACCGGCTCGACCCGCGTCGGTTCGCTG
CTGATGCGCGGCGCTGCAGACAGCGTCAAGCGGCTCTCGATCGAACTCGGCGGCAATGCCCCCTTCATCGTTTTCGACGA
CGCCAATCTCGATCTTGCGGTGGAAGGCGCGATCGCGTCGAAGTTCCGCAATGGCGGGCAGACCTGCGTCTGCGCCAACC
GAATTCTCGTGCAGGCCGGCGTCTATGACGCCTTCGCCGAGAAGCTCGGCGCCCGCGTCAACGCGATGAAGGTAGGCCCG
GGGACGGAGCCCGGCATCGCAATTGGCCCGATGATCAATGAGGCTGCGATCGACAAGATCGACCGCCACGTCGAAGACGC
GATTGCCAAGGGCGCAAAGCTGGCGGCGCGTGGCAGGTCGGTGCCGGGGGGCCGGCAATATACGGCCCCGATTGTGCTCA
CCGGCGCCACCACGGACATGCTGCTCGCCAGCGAGGAAACCTTCGGTCCCGTTGCCCCGCTCTTCCGCTTCGAGACCGAA
GACGAGGCGATCGCCATCGCCAACGGCACGCCCTTTGGGCTGGCCGCTTATTTCTACACCGAAGGCCTGAAGCGCTCCTG
GCGGGTGGCGGAAGCACTGGAGTTTGGCATGATCGGCCTTAACACCGGCGCCATCTCGACCGAAGTCGCGCCCTTCGGCG
GCGTCAAGCAATCCGGCCTCGGACGCGAGGGCGCCCAGGTCGGCATCGAAGAATATCTCGAGATGAAGAGCTTCCACATC
GGGGGGCTGGACTAG

Protein sequence :
MRLKDKELFRQLGLIGGEWIAGASGEVVDVIDPANQAVLGTVPDMGTAETRAAIEAANASFGPWKKKTHAERAAVLERWH
ALMIENLEDLAVLVTMEQGKPLEEARGEIRYGAAFVKWFAEESRRIGGHTIPSPTSDRRIVVLKEAVGVCAIVTPWNFPN
AMITRKVAPALAAGCTVVIKPSEFTPFSALALGVLAERAGIPAGVVNIVTGMPTAIGNEFMTNETVRKISFTGSTRVGSL
LMRGAADSVKRLSIELGGNAPFIVFDDANLDLAVEGAIASKFRNGGQTCVCANRILVQAGVYDAFAEKLGARVNAMKVGP
GTEPGIAIGPMINEAAIDKIDRHVEDAIAKGAKLAARGRSVPGGRQYTAPIVLTGATTDMLLASEETFGPVAPLFRFETE
DEAIAIANGTPFGLAAYFYTEGLKRSWRVAEALEFGMIGLNTGAISTEVAPFGGVKQSGLGREGAQVGIEEYLEMKSFHI
GGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 5e-129 57
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 1e-79 41