Gene Information

Name : SM11_pC0048 (SM11_pC0048)
Accession : YP_005723930.1
Strain :
Genome accession: NC_017327
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 50729 - 51505 bp
Length : 777 bp
Strand : -
Note : -

DNA sequence :
ATGAGAGCGGACAGACAGCAGATTGACCAGGCACTGGCAGCGACAGAAACCATCCGCAGCATTCTTCGGGAGGCGGTTCT
TGCGGTTTATCTGCATGGATCGGCAGTTTCGGGTGGCTTGCGACCGCAGAGTGACGTCGACCTCCTCGCCATCGTCGACT
GCCCCCTGGCCGACGAACAGCGTCGCGATCTTCTGGCGGCTTTGCTGCGGATTTCCGGTCGTCATCCGCGTGCGGTCGGA
ACTCCCCGATGCATCGAACTGATGGTGTTTCTGCGGGCAGATATTGCCACACCGAATTTTCCTGTTCGGGCTGAATTCAT
CTATGGCGAATGGTTGCGGGAGGCCTTTGAATCCGAAGAACTCCCGGTTCCCATATCCGATCCGGAAAATACGCTGGTGC
TGGCCCAGGCCCGACAAGAGGCCGTTCCACTGTTCGGCCCCGATGCAAAGGAGCTTCTGCCCTCGATTCCGCCGGAACAA
GTTCGCCGCGCCATGCGCGATGCACTCCCCTTATTGATCGACAGTCTACAGGGGGACGAGCGGAACGTCTTGCTGACGCT
TGCGCGCATGTGGCGTACATCAACCACCGGCGACTTCGTCACCAAGGATGCTGCAGCGACATGGGCGGCAGACCAGATGC
CTGATCAGGAGGCTGGCACGCTGATCCATGCGCGTGAGGCCTATCTGGGCAAGGTCAGGGACGACTGGGAAAATCGGCAG
GCTGCTTCCGAGCGGACGGCAACATTTCTGCGCCAGCGGGTATTAGAACTCCTATGA

Protein sequence :
MRADRQQIDQALAATETIRSILREAVLAVYLHGSAVSGGLRPQSDVDLLAIVDCPLADEQRRDLLAALLRISGRHPRAVG
TPRCIELMVFLRADIATPNFPVRAEFIYGEWLREAFESEELPVPISDPENTLVLAQARQEAVPLFGPDAKELLPSIPPEQ
VRRAMRDALPLLIDSLQGDERNVLLTLARMWRTSTTGDFVTKDAAATWAADQMPDQEAGTLIHAREAYLGKVRDDWENRQ
AASERTATFLRQRVLELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spC YP_190051.1 streptomycin 3''-adenylyltransferase Not tested Type-II SCCmec Protein 2e-48 41
ant(9) BAC57473.1 O-nucleotidyltransferase(9) Not tested Type-IIIinv SCCmec Protein 2e-48 41
spc BAA82204.1 O-nucleotydiltransferase(9) Not tested Type-II SCCmec Protein 2e-48 41
spc1 YP_039523.1 streptomycin 3''-adenylyltransferase 1 Not tested Type-II SCCmec Protein 2e-48 41
ant(9) NP_370577.1 O-nucleotidylltransferase Not tested Type-II SCCmec Protein 2e-48 41
ant(9) NP_373289.1 O-nucleotidylltransferase(9) Not tested Type-II SCCmec Protein 2e-48 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM11_pC0048 YP_005723930.1 hypothetical protein NC_002745.1125314.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein GU235985.1.orf1.gene Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_009782.5559439.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_002758.1121631.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_002952.2859154.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_002745.1123578.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_002745.1124853.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_009782.5559472.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_002758.1120013.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_002952.2859153.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_002745.1122823.p0 Protein 1e-48 41
SM11_pC0048 YP_005723930.1 hypothetical protein NC_002745.1124325.p0 Protein 1e-48 41