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Name : SM11_pC0024 (SM11_pC0024) Accession : YP_005723906.1 Strain : Genome accession: NC_017327 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase Function : - COG functional category : - COG ID : - EC number : - Position : 25576 - 26835 bp Length : 1260 bp Strand : + Note : Retron-type reverse transcriptase DNA sequence : ATGACTTCGGAAAGTACGACAGACAAGCCGTTTCGAATTGAGAAACGTCGAGTGTACGAAGCTTACAAAGCGGTCAAAGC CAACCGTGGCGCGGCCGGGGTGGACGGGCAGACGCTGGAGATATTTGAGAAAGACCTTGCAGCAAACCTCTACAAGATCT GGAATCGGATGTCCTCGGGAACCTACTTCCCGCCGCCGGTGCGCGCCGTCTCCATTCCGAAGAAGGCTGGAGGCGAAAGG GTTTTGGGTGTGCCCACGGTCAGCGATCGGATCGCGCAGATGGTGGTCAAGCAGATGATCGAGCCGGATTTGGACTCCCT CTTTCTTCCGGACTCCTACGGTTACAGGCCAGGAAAATCGGCCCTGGATGCCGTCGGAGTGACGCGTCAGCGGTGCTGGA AGTATGATTGGGTTTTGGAATTCGACATCAAAGGGCTGTTTGACAATCTTCCGCATGATCTCTTGCTGAAGGCGGTCAGA AAAGACGTCAAATGCAACTGGGCTCTGCTCTACATCGAAAGATGGCTGACTGCGCCTATGGAAAAGAACGGAGAAGTCAT CGAGCGGTCACGCGGTACCCCACAGGGAGGCGTGGTTAGCCCGATCTTGGCGAATCTCTTTCTGCACTATGCATTTGATC TCTGGATGACGCGGACGCATCCCGACCTTCCATGGTGTCGATATGCCGACGATGGTCTTGTTCACTGCCAGAGCGAGCAA CAAGCCGAAGCCCTCAAGGTGGAGCTGAGTTCTCGGCTGGCAGCGTGCGGACTTCAGATGCATCCGACAAAGACCAAGAT TGTCTACTGCAAGGATCAACGGCGCAGGGAGGCGTATCCGAATGTCACGTTCGACTTTCTCGGGTATCAGTTCCGGCCGC GACGGGTGGCGAACACACAGCGGGACGAGTTCTTCTGTGGCTACACGCCTGCGGTCAGTCCGACGGCGCTCAAGTCGATG CGGGCAACGATCAAAAGTTTGAACATCCCGCGGCAGACGCCGGGGACGCTGGCCGAAATAGCCAAACAGCTCAATCCACT CCTTCGGGGATGGATTGCCTACTATGGACGGTACAGTCGTTCGGCCCTGTCCACTCTGGCTGATTACGTTAATCAGAAAC TCAGGGCTTGGATCAGGCGAAAGTTCAAACGCTTTCAGTCCCATAAGACACGCGCCAGCCTCTTCTTGCGAAAGCTGGCG CGGGAAAATCCGGGGCTGTTCGTGCATTGGAAGGCGTTCGGAACGAACACGTTTACCTGA Protein sequence : MTSESTTDKPFRIEKRRVYEAYKAVKANRGAAGVDGQTLEIFEKDLAANLYKIWNRMSSGTYFPPPVRAVSIPKKAGGER VLGVPTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRCWKYDWVLEFDIKGLFDNLPHDLLLKAVR KDVKCNWALLYIERWLTAPMEKNGEVIERSRGTPQGGVVSPILANLFLHYAFDLWMTRTHPDLPWCRYADDGLVHCQSEQ QAEALKVELSSRLAACGLQMHPTKTKIVYCKDQRRREAYPNVTFDFLGYQFRPRRVANTQRDEFFCGYTPAVSPTALKSM RATIKSLNIPRQTPGTLAEIAKQLNPLLRGWIAYYGRYSRSALSTLADYVNQKLRAWIRRKFKRFQSHKTRASLFLRKLA RENPGLFVHWKAFGTNTFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 2e-118 | 55 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 9e-87 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SM11_pC0024 | YP_005723906.1 | RNA-directed DNA polymerase | VFG1512 | Protein | 5e-87 | 47 |
