Gene Information

Name : SM11_pC0180 (SM11_pC0180)
Accession : YP_005724062.1
Strain :
Genome accession: NC_017327
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 159306 - 160109 bp
Length : 804 bp
Strand : -
Note : Transposase and inactivated derivatives

DNA sequence :
ATGTGCCGGGACTGGGCAATCTCGATCCGGCGTGCCTATGGAGCGTTGAACTTCGATCGGTCGACCTACCACTACACCTC
TCGCCGTGCCGATCAGGCCGGCCTGGAACGTCGTATTCGCGAGATCTGCGAGACCCGTGTGCGCTACGGCTATCGGCGCG
TGCATGTGCTGCTGGAACGCGAAGGTTGGGGCACCAACATCAAGCAAACCTATCGCATTTACAGGGACTTGGGCCTGCAG
CTGCGCAACAAGACTCCAAAGCGCAGGGTCAAGGCAAAGCTGCGGGAAGATCGGCAGACAGCCATCGGCCCGAACGATGT
CTGGGCGATGGATTTCGTGCACGACCAACTCGCGACCGGAAAGAAGCTGCGGGTTCTGACGGTGGTCGACACCTTCTCAC
GTTATGTGCCGGTGCTTGATCCGCGTCACAGCTATCGCGGCGAAGACGTGGTGCAGACATTGGAGCGGGTATGCCGGCAA
GTCGGCTATCCGAGGACGATCCGCGTCGATCAGGGGACGGAGTTTGTGTCTCGCGATCTCGACCTATGGACCTATGCCAA
GGGCGTCACCCTGGACTTCTCACGTCCGGGAAAGCCCACGGACAACGCCTTCATCGAAGCCTTCAACGCCCGCTTCCGGG
CGGAATGCCTGAACCAGCACTGGTTCCTGACCCTTGCGGATGCGCGCGAAAAGATGGAGGATTGGCGTCGATACTACAAC
GAGGAACGGCCTCATGGCGCGATCGGCAATAAGGTGCCGATCTCGCTGATGAATTCCGGAGGCGCAACCAGCCCGCCTCC
CTGA

Protein sequence :
MCRDWAISIRRAYGALNFDRSTYHYTSRRADQAGLERRIREICETRVRYGYRRVHVLLEREGWGTNIKQTYRIYRDLGLQ
LRNKTPKRRVKAKLREDRQTAIGPNDVWAMDFVHDQLATGKKLRVLTVVDTFSRYVPVLDPRHSYRGEDVVQTLERVCRQ
VGYPRTIRVDQGTEFVSRDLDLWTYAKGVTLDFSRPGKPTDNAFIEAFNARFRAECLNQHWFLTLADAREKMEDWRRYYN
EERPHGAIGNKVPISLMNSGGATSPPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 3e-50 47
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 4e-41 46
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-51 44
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 4e-30 41