Gene Information

Name : SM11_pC1329 (SM11_pC1329)
Accession : YP_005725211.1
Strain :
Genome accession: NC_017327
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1217799 - 1219523 bp
Length : 1725 bp
Strand : -
Note : Transposase and inactivated derivatives

DNA sequence : 
ATGACCGATGCGGCCGATCAGCTTCCCGACGACCTTGCCAGCGCGCACGCGATGATCCTCGCGGAGCGTGCGGCCCGCCG
TGAAGCCGAAGCACTTGCCGCCCGCGCCCAGGCGGTGAACTCACATTCGGATGCACTGATTGCCCGACTGAGGCTTGAGA
TCGAGAAGCTGAAGCGCGACATCCATGGCAGCCGCTCGGAGCGCAAGGCCCGGCTTCTCGAACAGATGGAGCTGCAGCTC
GAGGAGCTGGAGGCCGACGCCGGCGAAGACGAGCTGGCGGCGGAGATGGCGGCACGCTCCTCGACGGTCCGGGCCTTCGA
GCGCAAGCGTCCATCGCGCAAAGCTTTCCCCGAGCATCTGCAGCGCGAACGCGTCGTCATCACCGCGCCAACCAACTGCC
CGTGCTGCGGTTCGGCCAAGCTGGCGAAGCTGGGTGAAGACGTCACCGAGACTCTGGAGGTGATCCCGCGCCAGTGGAAG
GTGATCCAGACCGTGCGCGAGAAGTTCACCTGCCGCGAATGCGAGAAGATCACCCAGCCGCCGGCACCCTTCCACGTGAC
GCCGCGCGGCTTTGCCGGGCCGAACCTCTTGGCGATGATCCTGTTCGAGAAGTTCGGTCAGCACCAGCCGCTGAACCGGC
AGAGCGAGCGGTACGCCCGCGAGGGCATCGACCTCAGCCTGTCGACGCTCGCCGACCAGGTCGGGGCCTGCGCCGCGGCG
CTGAAGCCGGTACATGCGCTGATCGAGGCGCATGTGCTGGCTGCCGAGCGGCTGCATGGCGACGACACCACCGTGCCGAT
CCTGGCGAAGGGCAAGACCGATACCGGCCGCATCTGGACCTATATCAGGGATGACCGGCCGTTCGGCGGAACGTCGCCGC
CGGCGGCACTCTATTATGCCTCGCGCGATCGACGGCAGGAGCATCCCGAGCGCCATTTGAAGAGCTTCACCGGCATTCTG
CAGGCCGACGCCTATGGCGGCTACAACCCATTGTTCAAGGTGGATCGCGATCCCGTTCCGCTGACGCAGGCGCTGTGCTG
GGCGCATTCTCGGCGCAAGTTCTTCGTGCTTGCCGACATCGCCAGCAACGCCAAACGCGGCAAGAATGCTGCCGCGATCT
CGCCGGTTGCGCTCGAGGCGGTCAAACGCATCGACGCCCTCTTTGATATCGAACGTGACATCAACGGGCTTGCCGCCGAC
GAACGGCTGCAACGACGTCAGAAGGACAGCCGTCCGCTCGTTGATGAACTTCAGACCTGGCTTCGAACTGAGCGAACAAA
GCTGTCGCGCAGTTCACCGGTCACTGAGCCGATCGATTACATGCTGAAACGCTGGGACGGCTTCACGTCCTTCCTCGGCG
ACGGCCGGATCTGCCTGACGAACAACGCCGCCGAACGAGCGCTGCGCGGTTTTGCCCTCGGCAGAAAGTCGTGGCTCTTT
TGCCGGCTCCGATCGTGGTGCCGATCGCGCCGCCTTCATGGCGACGCTGATCATGAGTGCCAAGCTCAATGGGGTCGATC
CGCAGGCGTGGCTTGCCGACGTCCTCGCCCGCATCGCCGACACCCCGATCACCAGGCTGGAGCAATTGCTTCCGTGGAAC
TGGGTGGCACCGTCGGCGAAAGCCGCCGCCGCGTAGGGGCACCTGATGGCTCACGATACCGACAAAATCCGCGCTCTTGT
TCGCGATGTGTTGCTCCGCGACTGGGATCCGATCGGCATATCTGA

Protein sequence : 
MTDAADQLPDDLASAHAMILAERAARREAEALAARAQAVNSHSDALIARLRLEIEKLKRDIHGSRSERKARLLEQMELQL
EELEADAGEDELAAEMAARSSTVRAFERKRPSRKAFPEHLQRERVVITAPTNCPCCGSAKLAKLGEDVTETLEVIPRQWK
VIQTVREKFTCRECEKITQPPAPFHVTPRGFAGPNLLAMILFEKFGQHQPLNRQSERYAREGIDLSLSTLADQVGACAAA
LKPVHALIEAHVLAAERLHGDDTTVPILAKGKTDTGRIWTYIRDDRPFGGTSPPAALYYASRDRRQEHPERHLKSFTGIL
QADAYGGYNPLFKVDRDPVPLTQALCWAHSRRKFFVLADIASNAKRGKNAAAISPVALEAVKRIDALFDIERDINGLAAD
ERLQRRQKDSRPLVDELQTWLRTERTKLSRSSPVTEPIDYMLKRWDGFTSFLGDGRICLTNNAAERALRGFALGRKSWLF
CRLRSWCRSRRLHGDADHECQAQWGRSAGVACRRPRPHRRHPDHQAGAIASVELGGTVGESRRRVGAPDGSRYRQNPRSC
SRCVAPRLGSDRHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 8e-73 41
unnamed AAC31494.1 L0015 Not tested LEE Protein 7e-73 41
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 7e-73 41
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 6e-72 41
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 6e-72 41
tnp AEA34686.1 transposase Not tested Not named Protein 8e-74 41
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 9e-73 41
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 9e-73 41
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 9e-73 41
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-72 41
unnamed AAL57570.1 unknown Not tested LEE Protein 4e-73 41
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 9e-67 41
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 9e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM11_pC1329 YP_005725211.1 transposase IS66 VFG0793 Protein 4e-73 41