Gene Information

Name : SM11_pC1308 (SM11_pC1308)
Accession : YP_005725190.1
Strain :
Genome accession: NC_017327
Putative virulence/resistance : Virulence
Product : decarboxylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1196452 - 1198722 bp
Length : 2271 bp
Strand : +
Note : -

DNA sequence :
ATGGAGTTCTACAAGGCATTCCCCATCGCTGTCATCGATGAAGATTACGAGGGTAAAAACGCGGCCGGGCGGGGCATGCG
CAGCCTCGCAGAGGCGATTGAAAAGGAAGGTTATCGGGTCGTTGGAGGGCTCACCTATGAGGATGCACGCCGCCTCGTGA
ACGTCTTCAACACCGAGTCCTGCTGGCTGATTTCAGTCGACGGGACGGAATCAAGTACGACGCGATGGGAGATTTTGGCC
GAGCTGCTCGCCGCGAAACGCTCCCGGAACAACCTGCTGCCAATCTTTCTGTTTGGCGACGATACAACGGCGGAAATGGT
GCCGGCGCCCGTGCTGCGCCACGCCAATGCCTTTATGCGTCTTTTCGAGGATTCTCCGGAATTCATGGCGCGCGCGATCG
TGCGCGCCGCGCAGAATTATCTTGAGAGGCTTCCGCCTCCAATGTTCAAGGCGTTGATGGAATACACGCTTCACGGCGCC
TATTCCTGGCACACGCCAGGGCACGGAGGCGGGGTGGCGTTTCGCAAGAGCCCGGTTGGCCAGCTCTTTTATTCGTTTTT
CGGAGAGAACACACTGAGGTCGGACATTTCTGTGTCCGTCGGCAGCGTTGGTTCGCTCCTCGATCATGTTGGGCCGATTG
GCGAGGGTGAGCGCAATGCCGCTCGTATATTTGGTGCGGATGAGACGCTGTTCGTTGTCGGCGGCACATCGACCGCCAAT
AAGATCGTATGGCACGGCATGGTCACTCGGAACGACCTCGTCCTCTGCGACCGAAACTGCCATAAGTCTATCCTGCACTC
GCTGATCATGACGGGTGCAACGCCGATTTACCTGACGCCCTCACGCAACGGCCTCGGCATCATCGGGCCGATTGCGAAGG
AGCAATTTACCCCAGAGGCAATTGCGCACAAGATCGCCGCCAGTCCGTTTGCCAGTGAGACGAACGGTAAAGTGCGCCTG
ATGGTAGTGACAAACTCCACCTATGATGGGCTCTGCTACAATGTAGATGAAATCAAATCGGCTCTCGGCGATGCGGTGGA
GGTACTGCATTTCGACGAGGCCTGGTTTGCTTACGCCAATTTTCACGAATTCTACGATGGTTATCACGCGATCTCTTCAA
CGAAGCCCGCGCGCTCGCAAGACGCCATAACATTCGCAACCCAGTCGACGCATAAGCTGCTGGCCGCCTTCTCTCAAGCT
TCAATGCTTCATGTGCAGCATGCCGTGGCGAAGCAACTCGACATCACACGCTTCAACGAAGCGTTCATGATGCACACATC
GACATCGCCGCAATATGGGATCATCGCCTCGTGCGACGTGGCTGCTGCCATGATGGAGCAGCCCGCCGGGCGGGCGCTGG
TACAGGAGACCATTGACGAGGCCATGAGTTTCCGTCGAGCCGTCAACGCCGTGCGGACACAGATGCAGGATTCCTGGTGG
TTCGAAGTCTGGGAGCCCCCCATCGCGGATCGGGCACCGAGCGACGCCAGGTCGGATTGGCTTCTTAAGCCCAACGACGC
GTGGCATGGTTTCGAAGACCTGGCTGAGAATCACGTGATGGTTGACCCGATCAAGGTAACGATCCTTTCGCCCGGACTCA
ATGCGGGCGGAGCGATGCTGGAGCATGGTATTCCGGCTGCAGTCGTCACGAAGTTCCTTTCTTCTCGCCGGATCGAAATC
GAGAAAACGGGTCTCTACTCTTTCCTGGTGCTCTTCTCCATGGGGATCACACGGGGCAAGTGGAGCACCCTGATCACCGA
GCTCTTGAACTTCAAAGACCTCTATGATGCCAATGCGCCTCTTTCACGCGCCCTTCCCGCCCTCGCGGCAGCCCATCCGG
ACGTCTACCGTGCAATGGGGCTCAGAGATCTTTGCGAGAAAATTCACGACGTGTACCGCAGCGACGACGTGCCGAATGCC
CAGCGCGAGATGTACACCGTGCTGCCCGAAATGGCACTGCGCCCGGCGGACGCCTACAACCGCTTGGTCAAGGGGTGCGT
CGAAAGCATCGATATCGACGAATTGATCGGCCGAACACTCGCAGTCATGATTGTACCCTATCCTCCGGGGATCCCGCTCA
TCATGCCTGGCGAACGGATCACCGCCGCCACAAGATCGATCCAGGACTATCTCGTCTACGCCCGGAGTTTCGACAGGAAA
TTCCCGGGATTTGAGACGGACATCCACGGGCTCCGTTTCGTCGCTAACCCGAGTGGACGGAGATATCTCGTGGATTGCAT
CGTCGAGGAGGGGCAGGATGATACCGCGTGA

Protein sequence :
MEFYKAFPIAVIDEDYEGKNAAGRGMRSLAEAIEKEGYRVVGGLTYEDARRLVNVFNTESCWLISVDGTESSTTRWEILA
ELLAAKRSRNNLLPIFLFGDDTTAEMVPAPVLRHANAFMRLFEDSPEFMARAIVRAAQNYLERLPPPMFKALMEYTLHGA
YSWHTPGHGGGVAFRKSPVGQLFYSFFGENTLRSDISVSVGSVGSLLDHVGPIGEGERNAARIFGADETLFVVGGTSTAN
KIVWHGMVTRNDLVLCDRNCHKSILHSLIMTGATPIYLTPSRNGLGIIGPIAKEQFTPEAIAHKIAASPFASETNGKVRL
MVVTNSTYDGLCYNVDEIKSALGDAVEVLHFDEAWFAYANFHEFYDGYHAISSTKPARSQDAITFATQSTHKLLAAFSQA
SMLHVQHAVAKQLDITRFNEAFMMHTSTSPQYGIIASCDVAAAMMEQPAGRALVQETIDEAMSFRRAVNAVRTQMQDSWW
FEVWEPPIADRAPSDARSDWLLKPNDAWHGFEDLAENHVMVDPIKVTILSPGLNAGGAMLEHGIPAAVVTKFLSSRRIEI
EKTGLYSFLVLFSMGITRGKWSTLITELLNFKDLYDANAPLSRALPALAAAHPDVYRAMGLRDLCEKIHDVYRSDDVPNA
QREMYTVLPEMALRPADAYNRLVKGCVESIDIDELIGRTLAVMIVPYPPGIPLIMPGERITAATRSIQDYLVYARSFDRK
FPGFETDIHGLRFVANPSGRRYLVDCIVEEGQDDTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 1e-118 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM11_pC1308 YP_005725190.1 decarboxylase VFG1670 Protein 6e-119 44