Gene Information

Name : SM11_pC1006 (SM11_pC1006)
Accession : YP_005724888.1
Strain :
Genome accession: NC_017327
Putative virulence/resistance : Unknown
Product : TRm23a transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 917029 - 918558 bp
Length : 1530 bp
Strand : +
Note : -

DNA sequence :
ATGCGGCGTGTCCGCGAGATATTGAGATATCGCTTCGAACAAGGACTTGGCCACAAGTCGATCGCGGTTCGGGTTGGAGC
TGCGCCATCGACGGTGCGCGAGACGCTTCGGCGTGCGGCCATTGCGGAGCTATCGTGGCCGTTGGGTGACGACATCAGCG
ATGCAGTCCTGGAAGCGGCGCTTTACAAGGCAGCCGGGACGAAGACGGGTCATCGTCGGAGCCCTGAGCCGGACTGGACG
CAGGTCCACCGCGAGCTGAAGCGCAAGCATATGACGCTGCAGATCCTTTGGGACGAATACATCAGCCGTTATCCGGAGGG
CTATCGTTACAGTCGCTTCTGTGACCTCTACCGCGGCTGGGCGATGAAGTTGCCTGTGACGATGCGGCAGGATCACGCGG
CCGGCGACAAGCTGTTCGTCGACTACGCCGGCGACACGGTCACGGTTGTCGTTGATCGGCTGTCCGGCAAGACACGGCAG
GCGCACCTGTTCGTGGCGGTTCTGGGAGCATCCAGCCTTTCATATGCGCAGGCACGTTGGAGCGAGACGCTTCCCGACTG
GATTGAATGCCATATCCTGGCGCTGGAGTTCTTTGGCGGTGCGCCAGCCTTGCTGGTTCCCGACAATGCCAAGGTAGCGA
TCATCAAGGCCTGCCACTTCGATCCCCAGGTCAACCGGACGTATTGCGGGATGGCGGCCCATTATGGCAGCGCCGTCTTG
CCGACGCGGCCGCGACGCCCGCGGGACAAGGCGAAAGTGGAAGCTGCGGTTCGTATCGTCGAACGTTGGCTGTTGGGCCG
GCTGCGCCATCGCATCTTCTATAGTTTGGCCGAGGTCAATGCGGCGATTGGCCAATTGCTCCATGATCTCAATGATAAGC
GCGTTCTGCGCCGTGTCGGCGCCACGCGCCGCCAATTGTTCGAGGAGCTTGATCGTCCGGCTTTGCGACCGCTGCCTGTC
GAACGTTATGTCTTTGCCGAATGGCGTATCCGGCGCGCCGGGCTGGATTATCACGTCGAGATCGAGCGGCACTATTATTC
CGTTCCCTATCGCTTTGCCCGCGAGCAGGTCGAGGCTCGTATCACCGCCAATACGATCGAGATCTTCCACAAGGGCGAGC
GAATTGCCGCTCACCGGCGCTCCAGCGGCAACGGCAAGCACACGACGATCCCCGATCATATGCCCTCTGCGCATCGCCGC
TTTGCCGACTGGACGATTGAACGGATTCAACGCGAAGCCTCTGCGATGGGGCCGGATGTTGCGCTGTTGTGCGAGCGCAT
TCTTGCCGACAGGCCTCATCCCGAGCAGGGCTTTCGAGCTTGCCTCGGCATCATCCGCCTCAACAAGAGCTTCGGCCGCG
ACAGGGTCAATGCCGCTTGCGGCCGTGCGTTGGAGATTGGCGCACGAACCTATGGCTCGGTGCGATCCATCCTCGACAAT
CACCTTGACCGGACGGCTGCCTCAAATGGAGCGGCGCCGCATGAACCGATCCATCACGCCAACATCCGCGGACCTCGCTA
TTACCACTAA

Protein sequence :
MRRVREILRYRFEQGLGHKSIAVRVGAAPSTVRETLRRAAIAELSWPLGDDISDAVLEAALYKAAGTKTGHRRSPEPDWT
QVHRELKRKHMTLQILWDEYISRYPEGYRYSRFCDLYRGWAMKLPVTMRQDHAAGDKLFVDYAGDTVTVVVDRLSGKTRQ
AHLFVAVLGASSLSYAQARWSETLPDWIECHILALEFFGGAPALLVPDNAKVAIIKACHFDPQVNRTYCGMAAHYGSAVL
PTRPRRPRDKAKVEAAVRIVERWLLGRLRHRIFYSLAEVNAAIGQLLHDLNDKRVLRRVGATRRQLFEELDRPALRPLPV
ERYVFAEWRIRRAGLDYHVEIERHYYSVPYRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKHTTIPDHMPSAHRR
FADWTIERIQREASAMGPDVALLCERILADRPHPEQGFRACLGIIRLNKSFGRDRVNAACGRALEIGARTYGSVRSILDN
HLDRTAASNGAAPHEPIHHANIRGPRYYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 5e-108 44
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 7e-108 44
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 3e-108 44
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 4e-100 41