Gene Information

Name : SM11_pD0494 (SM11_pD0494)
Accession : YP_005722827.1
Strain :
Genome accession: NC_017326
Putative virulence/resistance : Virulence
Product : putative TRAP dicarboxylate transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 509113 - 510426 bp
Length : 1314 bp
Strand : +
Note : TRAP-type C4-dicarboxylate transport system, large permease component

DNA sequence : 
ATGACGCTGTTCCATCTGGCCGGCCCCTCGCTTCTCGTCGTCGTCCTGTTTTTGCTGTCGACGCCGATCACCTGGGCCAT
GGCGATCGGAGCGTTCGCCTTCTTCCTCATCAATATGGACATGATCCCGCTCGCCAATTTCGCGCAGGAAATGGCTGAGG
GCAGTCAATCCGTGTCCTTGTTGGCGCTGCCGCTGTTCGTTCTTGCCGGCTGCATCATGAACGCCTCGGGCATCACGCGG
CGTCTGTTGGCGCTTGCGGACGTGCTCGTCGGCCACATGACGGGCGCGCTGGCGCAGATGTGCACTGTGCTCGGCACCTT
GCTCGGCGGACTTACCGCATCTGCCAATGCCGATGCGGCGATGCTCGCCAAGACGCTCGGCGTCGAGATGTCGCAACGGG
GCTACAGCCGGGCCTTCGCCGCGGTCATCACATCGTCGGCGGCCATTATCACGAGCCTCATTCCGCCGTCGATCGGCCTT
ATCGTCTATGGTTTTCTGGCGGAGACGTCCATCGGCCGGCTCTTCGCAGCGGGTGTCATACCTGGCCTCGTGCTGGCGAC
CGGGCTCATGGTCACCACCTATTTCATCGCCCGCAAGCGTGGTTACAAGCCGTTGCGCAAGGAGCGTGCCACCCGCGCGG
AGGGCGTCCGGGCGCTGATCGACGGGCTCTGGGCGCTGTCGATCCCGGTAGTGATCTTCGCCGGTACGCGATACGGTCTT
TTCACCACCACGGAAGCCGGTGCGGTGGTGGTCGTCTACGTGCTCTTCGTCGCCGTGTTCGGCTACCGCGAATTCACCTT
CCGCCAGATCCCGGAGGTTCTTGCCGAGGCCGTGCGCGATTCGGCCGTGGTCATGATCATGATCTGCGCGGCGGCAGCCT
TCGGTTTCTATCTCGCCTGGGAGCAGGTGCCGCAGGCCATGTCCGGCTGGCTCGGCGAAGCCACCGATAATCCGCTCCTG
ATGCTGCTCCTCATCAACGTCCTGCTGATCGTCATCGGCACGGCGATCGAGGGGTCGGCGGCGCTGATCATCCTGACGCC
CATGCTGATCCCGATCATCGACGGCGTGGGCATCGATCGCGTGCATTTCGGCGTCGTCTTCATCACGAACCTGACCATCG
CCGGCATCACGCCGCCGGTCGGGGGATTGATGTACATCTCGTCCATGGTGCTGAAAGTGCCGATGATGGCCTATGCCCGC
GAAGTGCTGCCTTACCTGGCGATGATGATGGTCATTCTCGTCATGCTGAGCATGTTCCCGCAGCTGTCGCTTTGGCTGCC
GAACCTGGTCTATGGGACGACGGCGGTCCAATAG

Protein sequence : 
MTLFHLAGPSLLVVVLFLLSTPITWAMAIGAFAFFLINMDMIPLANFAQEMAEGSQSVSLLALPLFVLAGCIMNASGITR
RLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVEMSQRGYSRAFAAVITSSAAIITSLIPPSIGL
IVYGFLAETSIGRLFAAGVIPGLVLATGLMVTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGL
FTTTEAGAVVVVYVLFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSGWLGEATDNPLL
MLLLINVLLIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHFGVVFITNLTIAGITPPVGGLMYISSMVLKVPMMAYAR
EVLPYLAMMMVILVMLSMFPQLSLWLPNLVYGTTAVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 3e-40 42
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-40 42
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 3e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM11_pD0494 YP_005722827.1 putative TRAP dicarboxylate transporter VFG1110 Protein 1e-40 42