Gene Information

Name : SM11_pD1313 (SM11_pD1313)
Accession : YP_005723646.1
Strain :
Genome accession: NC_017326
Putative virulence/resistance : Virulence
Product : putative TRAP dicarboxylate transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1401541 - 1402821 bp
Length : 1281 bp
Strand : -
Note : TRAP-type C4-dicarboxylate transport system, large permease component

DNA sequence : 
ATGGCGACGCTCTTCGGGGGATGGTTTGCCCTTCTGATCGCCGGCATGCCGGTTGGATTCACGCTGATCGTGGCTGCGCT
CGCCTACATGCTCTGGCAGGGGACGGGCCTGAACTTTGCCGGCCAGCGCATGATCGCCGGCCTCAACAGCTTTCCGCTGC
TTGCGGTCCCCTTTTTCATCCTCACCGCACAATTGATGAATCTCTCGGGCGTGACCGAGCGCATTTTCGACTTCGCCAAG
GCGCTTGTCGGCCATATCAGGGGCGGGCTAGGCCATGTGAACATCATGGCGAGCGTGCTGTTTTCCGGCATGTCCGGCTC
GGCCGTCGCCGATGCCGCCGGCCTTGGTCAGCTTGAGATAAAGGCCATGCGCGACGCCGGCTATGACGAGCAGTTTTCCG
GGTCGATCACCGCCGCATCGGCCATCATAGGCCCGCTCATCCCGCCCTCCATTCCCCTCGTGGTCTACGGCGTGATCGCC
AATACCTCGATCGGGGGCCTTTTTCTCGGCGGGATCGTGCCCGGCCTCCTTTGCGCGGCCTCGCTCATGATCATGGTCTA
CGTGATCGCCTGGCGCCGCAACTATGCGACCGCGCAGCGCGCCGGCTTTCGCCGGGTGTGGTCCACCTTCTGGCACGCGC
TGCTTCCGCTCATCACGCCCTTCATCATCATCGGCGGCATCTTTGCAGGGGTGTTCTCGCCGACCGAGGCTGCCGTGGTC
GCGGCCAGCTATGCGCTCTTCCTCGGTGTCGTCGTCTACCGTGAAATCACCTTCGCCAAACTTGTGACCGTACTGCGTGA
GACTGTCAGCCATACGGCCGCCGTCGGCCTTCTCATCATGGGCGTGTCGCTATTCGGCTATGTGATCGCGCGGGAGCAGG
TACCCCAGCACGTCGCCACGTTCTTCCTCACTTATGCGGACGATCCGCTGACATTCCTGGTCCTCGTCAATCTCATGCTG
CTTGCGCTCGGGACCTTTATCGAGGCGCTGGCAATCCTGCTGCTCATCGTACCGGTGCTGGTCCCGACCGCGCTCCAATT
CGGGGTGGATCCCGTCCACTTCGGTGTCATGGTCGTGTTCAACCTGATGATCGGCATTTTGACGCCGCCCATGGGTGTGG
CGCTCTTCGTCGTGTCCAAGGTCGCCGACATTCCCTTCGGCGTGCTCGCACGCGGTATCCTGCCTCTTCTCATTCCGCTC
ATCGTCGTCCTGGTGCTGATCACCATCTTTCCGGCGCTCGTCACCTTCATCCCCGACCAGATGCTCGGAGCCGCCCGATG
A

Protein sequence : 
MATLFGGWFALLIAGMPVGFTLIVAALAYMLWQGTGLNFAGQRMIAGLNSFPLLAVPFFILTAQLMNLSGVTERIFDFAK
ALVGHIRGGLGHVNIMASVLFSGMSGSAVADAAGLGQLEIKAMRDAGYDEQFSGSITAASAIIGPLIPPSIPLVVYGVIA
NTSIGGLFLGGIVPGLLCAASLMIMVYVIAWRRNYATAQRAGFRRVWSTFWHALLPLITPFIIIGGIFAGVFSPTEAAVV
AASYALFLGVVVYREITFAKLVTVLRETVSHTAAVGLLIMGVSLFGYVIAREQVPQHVATFFLTYADDPLTFLVLVNLML
LALGTFIEALAILLLIVPVLVPTALQFGVDPVHFGVMVVFNLMIGILTPPMGVALFVVSKVADIPFGVLARGILPLLIPL
IVVLVLITIFPALVTFIPDQMLGAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 3e-92 62
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 3e-92 62
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-92 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM11_pD1313 YP_005723646.1 putative TRAP dicarboxylate transporter VFG1110 Protein 1e-92 62