Gene Information

Name : SM11_chr0830 (SM11_chr0830)
Accession : YP_005719369.1
Strain : Sinorhizobium meliloti SM11
Genome accession: NC_017325
Putative virulence/resistance : Virulence
Product : probabable aldehyde dehydrogenase protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 868908 - 870416 bp
Length : 1509 bp
Strand : +
Note : NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGCTGCATCAGAAGATCGTCGAGAACCCCTACAAGCAGAAATACGGGAACTTCATCGGCGGCGAATGGCGCGAACCCGT
TGCAGGCCGCTATTTCGACAACACGACGCCGATCACCGGCGGCACGCTTTGCGAGGTCGCGCGTTCGGACGCCGCCGACA
TCGAGATCGCCCTCGACGCGGCGCACGCCGCAAGGGAGAAATGGGGCCGGACCTCGACGACGGAGCGGTCGAACATTCTG
ATGAAGATCGCCGCCCGCATGGAGGACAATCTGGAGCTTCTGGCACGGGCGGAAACCTGGGACAACGGCAAGCCGATCCG
CGAGACGATGGCCGCCGACATTCCGCTGGCGATCGATCATTTCCGCTATTTCGCGGCCTGCATCCGTGCACAGGAAGGCT
CGATCGGCGAGATCGACCACGACACCGTCGCCTACCATTTCCACGAGCCGCTCGGCGTCGTCGGCCAGATCATTCCCTGG
AACTTCCCGATCCTGATGGCCGCCTGGAAGCTTGCGCCGGCGCTTGCCGCCGGAAACTGCGTCGTGCTGAAGCCGGCCGA
GCAGACGCCGGGCTCGATCCTCGTCTGGGCGGAACTCATCGGTGACCTCCTGCCGCCGGGTGTCCTCAACATCGTCAACG
GCTTCGGCCTCGAAGCGGGCAAGCCGCTCGCCACCAGCCCGCGCATCGCCAAGATCGCTTTTACCGGCGAGACGACGACC
GGGCGGCTGATCATGCAATATGCCAGCCAGAACCTCATCCCGGTCACGCTGGAGCTCGGCGGAAAGTCGCCGAACATCTT
CTTCGCGGACGTCGCCAGCGAGGACGACGACTTCTTCGACAAGGCGCTGGAAGGCTTCGCCATGTTCGCGCTGAACCAGG
GCGAGGTCTGCACCTGCCCGAGCCGGGCACTGGTACAGGAGAGCATCTACGACCGCTTCATGGAGCGGGCGGTAAAGAGG
GTCGAGGCGATCCGGCAGGGCAATCCGCTCGATGAAGCAACCATGATCGGCGCCCAGGCTTCGAGCGAACAGCTCGAGAA
AATCCTCGCCTATATCGAAATCGGCAAGGAGGAAGGTGCCGAGGTGCTGACCGGCGGCGGGCGCAACGTGCTCGAAGGCG
ATCTTTCCGGCGGCTACTACGTCAAGCCGACCGTATTCCACGGCCACAACAGGATGCGCATCTTTCAGGAGGAGATTTTC
GGGCCGGTCGTGTCGGTCACGACCTTCAAGACGGAAGCCGAGGCGCTGGAAATCGCCAACGACACGCTCTACGGGCTTGG
CGCCGGCGTGTGGAGCCGCGATGCCAACCGCTGCTACCGCTTCGGCCGCGCGATCGAAGCCGGCCGGGTCTGGACCAATT
GCTACCACGCCTATCCGGCGCACGCCGCCTTCGGCGGTTACAAGCAGTCCGGCATCGGGCGCGAGACGCACAAGATGATG
CTGGATCACTATCAGCAGACGAAGAACATGCTGGTCAGCTACAGCCCGAAGGCTCTCGGCTTCTTCTGA

Protein sequence :
MLHQKIVENPYKQKYGNFIGGEWREPVAGRYFDNTTPITGGTLCEVARSDAADIEIALDAAHAAREKWGRTSTTERSNIL
MKIAARMEDNLELLARAETWDNGKPIRETMAADIPLAIDHFRYFAACIRAQEGSIGEIDHDTVAYHFHEPLGVVGQIIPW
NFPILMAAWKLAPALAAGNCVVLKPAEQTPGSILVWAELIGDLLPPGVLNIVNGFGLEAGKPLATSPRIAKIAFTGETTT
GRLIMQYASQNLIPVTLELGGKSPNIFFADVASEDDDFFDKALEGFAMFALNQGEVCTCPSRALVQESIYDRFMERAVKR
VEAIRQGNPLDEATMIGAQASSEQLEKILAYIEIGKEEGAEVLTGGGRNVLEGDLSGGYYVKPTVFHGHNRMRIFQEEIF
GPVVSVTTFKTEAEALEIANDTLYGLGAGVWSRDANRCYRFGRAIEAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMM
LDHYQQTKNMLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-141 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-146 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-146 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-146 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-145 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-58 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM11_chr0830 YP_005719369.1 probabable aldehyde dehydrogenase protein VFG0082 Protein 3e-141 66