Gene Information

Name : smpB (SM11_chr0724)
Accession : YP_005719263.1
Strain : Sinorhizobium meliloti SM11
Genome accession: NC_017325
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 758927 - 759406 bp
Length : 480 bp
Strand : +
Note : tmRNA-binding protein

DNA sequence :
ATGGCACCGAAAGGCAGCGAACGCACGGTCAAGAAGGTTGTCGCGGAAAATCGCAAGGCCCGCTTCAACTACGAGATCGT
CGACACCTACGAGGCCGGTCTGGTCCTGACCGGCACGGAGGTCAAGTCGTTGCGCGAGGGGAAGGCCAATATCGCGGAAT
CATACGCGACCGACGAAGGCGGCGAGATCTGGCTCATCAATTCCTACCTGCCCGAATATCTGCAGGCCAACCGCTTCAAT
CACGAGACGCGCCGCCGCCGCAAATTGCTCCTGTCGAAAAGGGAAGTGAACCGTCTGCAGGGTGCGGTCAACCGCGAGGG
GATGTCGCTGATACCGCTCCGGATATACTTCAATGAGCGAGGCAGGGTGAAGCTGGAACTGGCGCTCGGCAAGGGCAAGA
AGCTGCACGACAAACGAGAGACCTCCAAGGAACGCGATTGGAACCGGCAAAAGAACAGGCTCCTCAAGGAGCGCGGCTGA

Protein sequence :
MAPKGSERTVKKVVAENRKARFNYEIVDTYEAGLVLTGTEVKSLREGKANIAESYATDEGGEIWLINSYLPEYLQANRFN
HETRRRRKLLLSKREVNRLQGAVNREGMSLIPLRIYFNERGRVKLELALGKGKKLHDKRETSKERDWNRQKNRLLKERG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-20 52
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 7e-16 47
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 3e-15 47