|
Name : kdsB (SM11_chr3697) Accession : YP_005722186.1 Strain : Sinorhizobium meliloti SM11 Genome accession: NC_017325 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : - Position : 3761779 - 3762531 bp Length : 753 bp Strand : + Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase DNA sequence : ATGAATCGTGAACAATCGGGCAAAACCCTCGTACTCATTCCGGCGCGCATGGCGTCGACGCGCCTTCCCGGCAAGCCGCT TGCCGATATTTGCGGCCTGCCGATGATCGTGCAGGTGGCAAGGCGGGCGGCGGAAGCCGAGGTCGGGCGGATCGTGGTGG CGGTCGATCATCCCGATGTCTTAGCGGCCGTGACCGGCGCCGGCTTCGAGGCGGTCATGACGCGTGTCGATCACCAGTCC GGCTCCGACCGGATTCACGAGGCGCTCCTGAAGGCCGATCCGCATGGCGAAGCGGAAATCGTCATCAACGTGCAGGGCGA TCTTCCGACCATCGAGCCCGGTCCGATTCGTGCCGCGCTGAAGCCGCTGGAAAATCCCGCGACCGACATCGCCACACTGA CCGTGGCGATCACCGACGAACACGAAAAGACCAATCCCAACGTCGTCAAGGTCGTCGGCTCCCCGCTTTCCGACAGCCGC TTTCGCGCGCTCTATTTCACCCGCGCCACCGCGCCCTATGGCGAAGGGCCCCTCTATCACCACATCGGGCTTTATGCCTA TCGTCGCAAGGCGCTGGAGACTTTCGTTTCGCTGAAGCCGTCGACGCTCGAGAAGCGCGAATCGCTGGAGCAATTGCGGG CGCTCGAAGCGGGCATGCGCATCGATGTCGAGGTCGTGGACTCAGTGCCGCTCGGGGTCGACACGCCGGCCGATCTCGAC AAGGCCCGCCGCATCCTTTCCGCCCGCGTCTGA Protein sequence : MNREQSGKTLVLIPARMASTRLPGKPLADICGLPMIVQVARRAAEAEVGRIVVAVDHPDVLAAVTGAGFEAVMTRVDHQS GSDRIHEALLKADPHGEAEIVINVQGDLPTIEPGPIRAALKPLENPATDIATLTVAITDEHEKTNPNVVKVVGSPLSDSR FRALYFTRATAPYGEGPLYHHIGLYAYRRKALETFVSLKPSTLEKRESLEQLRALEAGMRIDVEVVDSVPLGVDTPADLD KARRILSARV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 5e-29 | 45 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 6e-30 | 45 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-29 | 45 |
