Gene Information

Name : gabD1 (SM11_chr3479)
Accession : YP_005721975.1
Strain : Sinorhizobium meliloti SM11
Genome accession: NC_017325
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase [NADP+] protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3518413 - 3519867 bp
Length : 1455 bp
Strand : +
Note : NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGAATCTGAAAGACCCGTCGCTGTTTCGCCAGGCTGCTCTCGTGGGCGAGACCTGGATCGAAGCCGACCCGAAGAATGC
GATCGAGGTGAACAATCCAGCGACCGGCGAAATCATCGGCCGCGTCCCGAAGCTCGGCGCCGCCGATACCCGGACCGCGA
TCGAGGCCGCGGCGCGGGTGCAGAAGGAATGGGCGGCGAGGACCGCCAAGGAGCGCTCGGCGGTGCTGCGCCGCTGGTTC
GAGCTGATGATCGAAAACAAGGACGATCTCGGCCGGATTCTGACGATGGAGCAGGGCAAGCCGCTAGCGGAGGCGACAGG
CGAGATCGTCTACGGAGCGAGCTTCATCGAATGGTTCGCGGAAGAGGCGCGGCGTGTCTATGGCGATCTCGTCCCCGGGC
ATCAGAAGGACAAGCGCATTCTGGTGATGAAGCAGCCGATCGGCGTCGTCGCCGCGATCACGCCGTGGAACTTCCCGAAC
GCGATGATCACCCGCAAGGCCGGGCCGGCCCTTGCCGCCGGCTGCGCCATGGTCTTGAAGCCGGCAGCGCAGACGCCGTT
TTCGGCGATCGCCATCGCCGTGCTCGCCGAGCGCGCGGGCATGCCGAAAGGTCTCTTCAGCGTCATTACCGGCTCCGCGC
GCGAGATCGGCGCCGAGATGACTTCGAACCCGACCGTCCGCAAGCTTACCTTTACCGGCTCGACCGAGGTCGGCGCAGAG
CTCTACCGCCAGAGCGCGGCAACGATCAAGAAGCTTGGCCTGGAACTCGGCGGCAACGCCCCGTTCATCGTCTTCGATGA
TGCCGATCTCGATGCGGCGGTCGAAGGCGCGCTGATCGCCAAGTTCCGCAACAATGGCCAGACCTGCGTCTGCGCCAACC
GCATCTATGTGCAGGACGGCGTCTACGAGGCCTTCTCCGACAAGCTCGCCCAGGCCGTCGCCAAGCTCAAGACCGGCAAC
GGCATGGAGGACGGCGTCATCCTCGGACCGCTGATCGACCAGCCGGCGCTGAAAAAGGTCGAGGAGCATGTGGCGGATGC
GCTTGCGAAGGGCGCGCGCGTGGTGCAGGGCGGCCGTCGCCATTCACTCGGCGGCACCTTCTACGAGGCGACGGTGCTGG
CCGACGTGACCCAGGCGATGGCGGTCGCGCGGGAAGAGACCTTCGGACCGGTAGCGCCGCTCTTCCGCTTCAAGGACGAG
TCGGATGTGATCGCACAGGCGAACGACACCGAATTCGGCCTCGCCTCCTATTTCTACGCCAAGGACCTCGCCCGCGTCTT
CCGCGTGGCGGAAGCGCTGGAATACGGCATGGTCGGTGTCAATACAGGCCTGATCTCCACGGCCGAAGCACCCTTTGGTG
GCGTCAAGCTCTCGGGCCTTGGCCGCGAGGGCTCGAAATACGGCATCGAGGAATTCATGGAGATCAAATATGTCTGCCTC
GGCGGCATTGCCTGA

Protein sequence :
MNLKDPSLFRQAALVGETWIEADPKNAIEVNNPATGEIIGRVPKLGAADTRTAIEAAARVQKEWAARTAKERSAVLRRWF
ELMIENKDDLGRILTMEQGKPLAEATGEIVYGASFIEWFAEEARRVYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPN
AMITRKAGPALAAGCAMVLKPAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE
LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRIYVQDGVYEAFSDKLAQAVAKLKTGN
GMEDGVILGPLIDQPALKKVEEHVADALAKGARVVQGGRRHSLGGTFYEATVLADVTQAMAVAREETFGPVAPLFRFKDE
SDVIAQANDTEFGLASYFYAKDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSKYGIEEFMEIKYVCL
GGIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 6e-151 61