Gene Information

Name : SM11_chr3425 (SM11_chr3425)
Accession : YP_005721921.1
Strain : Sinorhizobium meliloti SM11
Genome accession: NC_017325
Putative virulence/resistance : Virulence
Product : probabable NAD-dependent L-sorbosone dehydrogenase protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3453469 - 3454977 bp
Length : 1509 bp
Strand : -
Note : NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGACGGTGGTGGTGAGGCCGAAGGCGCTCGGCGACTACGATACCCGCGAATTCCGGATGCTGATCGACGGTCAGTGGGT
GGATGGCGCCGAGGGCCGCACGATCGAGCGGGTGGCGCCGGGTCACGGCGTCGTCGTCAGCCGCTATCAGGCGGCGGCGA
AAGCGGATGCCGAACGGGCGATCGCCGCCGCACGGCGCGCTTTCGACGAAGGTCCATGGCCGCGCATGACCGCCTCGGAA
CGGTCGTTGATCCTGCTCAGGGCCGCCGACATGATTGCCGCGCGAGCGGATGAGCTCGCTTTTCTCGACGCGGTCGAATC
CGGCAAGCCGATCAGCCAGGCGAAGGGCGAATTGGCGGGTGCCGCCGACATCTGGCGCTATGCGGCAGCACTTGCCCGCG
AACTCTCGGGCGAAAGCTACAATACGCTCGGGGAGGGTACGCTCGGCGTCGTGCTGCGCGAGCCGATCGGCGTCGTATCG
ATCATCACGCCGTGGAACTTCCCTTTCCTGATCGTCAGCCAGAAGCTTCCCTTCGCCCTTGCCGCCGGCTGCACGACGGT
GGTGAAGCCCTCTGAACTCACCTCGGCCTCGACGCTGGTTCTCGGCGAAATCCTGGAAGCGGCCGGCGTGCCCCAGGGGG
TCGTGAACATCATCGTCGGCACGGGGCCGGAGGCCGGCGCGCCGCTCACCACGCACCCGCATGTCGACATGGTCTCCTTT
ACCGGCTCGACCGGAATCGGCCAGCTGACCATGGCGAATGCGGCGCAGACCCTGAAGAAGGTCTCGCTGGAACTCGGCGG
CAAGAACCCGCAGATCGTCTTTCCGGACGCAAACCTGGACGAATTCATCGATGCGGCCGTCTTCGGCGCCTATTTCAATG
CCGGCGAATGCTGCAATGCCGGCTCGCGGCTGATCCTGCACCGCGATATCGCCGAGGAGGTGACGGCGCGCATCGCCAGC
CTCTCGGCCAAGGTCAAGGTCGGCGATCCGCTCGACCCCGAAACGCAGGTCGGCGCGATCATTACGCCGCAGCATCTGCA
AAAGATCGCCGGCTATGTTTCTTCGGCGTCGAACGAAGGCGCGAGAATAGCCCATGGCGGCACCACGCTCGATCTCGGCA
TGGGACAGTTCATGGCGCCGACCATCCTGTCGGCCGTTCGGCCCGAAATGGCCGTGGCCCGGGAGGAAGTCTTCGGGCCG
GTTCTCTCCGTTCTGACTTTCGAGAAGACGGAAGAGGCGATCCGCATCGCCAATTCGATCGATTACGGGCTTTCCGCCGG
AGTCTGGAGCCGCGACTTCGATACCTGCCTGACGATCGGGCGGCGCGTACGCGCCGGCACGGTCTGGATGAACACCTTCA
TGGATGGCGCATCCGAGCTGCCTTTCGGCGGCTACCGGCAATCCGGGCTCGGCCGCGAGCTCGGTCGCCATGCTGTCGAG
GACTATACGGAGACGAAGACGCTCAACATGCATATCGGCCGGCGCAGCAACTGGTGGATGCCGCGCTGA

Protein sequence :
MTVVVRPKALGDYDTREFRMLIDGQWVDGAEGRTIERVAPGHGVVVSRYQAAAKADAERAIAAARRAFDEGPWPRMTASE
RSLILLRAADMIAARADELAFLDAVESGKPISQAKGELAGAADIWRYAAALARELSGESYNTLGEGTLGVVLREPIGVVS
IITPWNFPFLIVSQKLPFALAAGCTTVVKPSELTSASTLVLGEILEAAGVPQGVVNIIVGTGPEAGAPLTTHPHVDMVSF
TGSTGIGQLTMANAAQTLKKVSLELGGKNPQIVFPDANLDEFIDAAVFGAYFNAGECCNAGSRLILHRDIAEEVTARIAS
LSAKVKVGDPLDPETQVGAIITPQHLQKIAGYVSSASNEGARIAHGGTTLDLGMGQFMAPTILSAVRPEMAVAREEVFGP
VLSVLTFEKTEEAIRIANSIDYGLSAGVWSRDFDTCLTIGRRVRAGTVWMNTFMDGASELPFGGYRQSGLGRELGRHAVE
DYTETKTLNMHIGRRSNWWMPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM11_chr3425 YP_005721921.1 probabable NAD-dependent L-sorbosone dehydrogenase protein VFG0082 Protein 5e-70 41