Gene Information

Name : xerD (SM11_chr2843)
Accession : YP_005721350.1
Strain : Sinorhizobium meliloti SM11
Genome accession: NC_017325
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2816116 - 2817051 bp
Length : 936 bp
Strand : +
Note : Site-specific recombinase XerD

DNA sequence :
ATGACGGATATGTCCGCAGCCTACGTCGAAGCCTTCCTGGAAATGATGAGCGCCGAGCGTGGAGCGGCGGCGAACACGCT
GCAATCCTACGAGCGCGACCTCGAGGACGCGCGTTCCTTCCTGCGCTCGCGCGGCACCGGGCTCACCGACGCCTCGGCCG
ACGATCTCAGAAGCTATCTCTCCCATCTCGCAGGCCAGGGCTTCAAAGCGTCGTCGCAGGCGCGGCGGCTCTCGGCCCTC
CGGCAATTTTACAAGTTCCTCTATGCGGAGGGGCTGCGCACGGACGACCCGACGGGCATCCTCGACGCGCCGAAGAAAGC
CCGCACCCTTCCGAAGACCCTCAGCATCGAAGACGTCACCCGGCTGATCGGCCAGGCGGAAGCGGAGGCGAAATCCGGCA
GCGACGACGTGATGGCGAAATTGCGCATGCACGCGCTGATCGAGCTCCTTTATGCGACAGGCATGCGCGTCAGCGAGCTC
GTGTCGCTGCCGGCGAGCGTGCTTGCACAGAACGGGCGTTTTCTCATCATTCGCGGCAAGGGTAACAAGGAAAGGCTCGT
ACCGCTGTCGCAGGCGGCGATCCGCGCCATGCGGGCCTATGGGGAAGCACTGCAGGAAGAGAGTGCGGACAGCCCCTGGC
TGTTCCCCTCCAATGGCAAGTCCGGCCATCTGCCGCGGCAGGTCTTTGCCCGCGACCTCAAGAGCCTTGCGGCACGGGCA
GGCATCCGGGTGGCAGCGATTTCGCCGCACGTGCTGCGCCACGCCTTCGCCAGTCATCTGCTCGCCAACGGCGCCGACCT
TCGTGCCGTACAGGAACTGCTCGGCCATTCAGACATTTCCACGACACAAATCTATACGCATGTGCTGGAAGAACGGCTTC
ACGACCTCGTGCAAAACCATCACCCCCTTGCCAAACAGGCGAAAAAACAGGATTAG

Protein sequence :
MTDMSAAYVEAFLEMMSAERGAAANTLQSYERDLEDARSFLRSRGTGLTDASADDLRSYLSHLAGQGFKASSQARRLSAL
RQFYKFLYAEGLRTDDPTGILDAPKKARTLPKTLSIEDVTRLIGQAEAEAKSGSDDVMAKLRMHALIELLYATGMRVSEL
VSLPASVLAQNGRFLIIRGKGNKERLVPLSQAAIRAMRAYGEALQEESADSPWLFPSNGKSGHLPRQVFARDLKSLAARA
GIRVAAISPHVLRHAFASHLLANGADLRAVQELLGHSDISTTQIYTHVLEERLHDLVQNHHPLAKQAKKQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-43 42
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-43 42