Gene Information

Name : SM11_chr2693 (SM11_chr2693)
Accession : YP_005721207.1
Strain : Sinorhizobium meliloti SM11
Genome accession: NC_017325
Putative virulence/resistance : Unknown
Product : Dipeptide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2661269 - 2662897 bp
Length : 1629 bp
Strand : -
Note : ABC-type uncharacterized transport system, duplicated ATPase component

DNA sequence :
ATGACGATGGACAAGCTTCTCACCGTTTGCGGCCTTTCGCTTGAAGTCGCAAGAACCGGCCAGCAGGTCGTCAAGTCGGT
CTCCTTCGACCTGGCGCCGGGCGAGATCTTCGGCATCGTCGGCGAAAGCGGCTCCGGCAAGACGCTGGCGACCCGAGCGC
TGATCTCGCTGCTGCCGCCGACCATCAAGGTCGCTGACGGGTCGGTGTCCTACAAGGGCCGCGACGTGCTGAAGATGAAG
GAAAATGAGCTTCGCCATCTGCGCGGCGCAGAGATCGGCGTCGTCTTCCAGGAGCCGATGACCTCACTCAACCCGTCGAT
GACGATCGGCCGGCAGCTGGAGGAAGGACTCATCCTGCACACCAAGGCCTCGGCGCAGGAGCGACGCTCCCTCATACTCG
ACATGTTGAAGCGGGTCGGCATCCGTGATCCGGAGGGCGCGCTTTCCTCCTATCCGCACGAGTTTTCGGGCGGCATGCGC
CAGCGCATCATGCTTGCCTCCGTCATGCTTTTGAAGCCGGCGCTGCTGATCGCCGATGAGCCGACCACGGCACTCGATGC
CGTCATCCAGCGCGACGTGATGGAACTGATGGTGGAACTGACGCGGGCGGAAGGTACGGCCATTTTGCTGATCAGCCACG
ATCTTCCGATGGTGGCGCGCTACACGAGCCGTATCGTCGTGATGGAAAAGGGCGCGATCGTGGAAAAGGGCCGGACCGAG
GACCTGCTCAAGGCACCGCAGCATCCTTACACGAAGAAGCTCCTCTCCTCGCTGCCCTTCCGCGGCCGGCCGCGCCAGAT
CGATCTGACGAGCGTGCCCATGATCTCGGCCCGCGATATCATCGTGGACTATGCAGGCCGAAAGTCGCTGTTCAGGAAGA
ACAAGCCGAAGCGCGCGCTGCATGGCGTCAGCATCGACATTCACGAGGGCGAGGTCGTGGCACTCGTCGGCGGTTCCGGC
TCCGGCAAGACGACGCTCGGCCGCACCATTGCCGGTCTCGTCACGGAAAGCGAGGGCCGCATCCAGTTCCAGGGACGGCC
GCGCACTGAAAACTGGACCGATTATCGCCTCAACTGCCAGATGGTGTTCCAGGATCCTTATTCATCGCTCGATCCGCGCA
TGACCATCGAGGCGCTGGTCGAAGAGGCGCTGAGGCCGGTGCCGGGCCTGGATGGCAAGGCCAAGCGCAAGCGTACCCTG
GAAACGCTGGAGGAAGTCGGGCTCGGGGTCGACTATGCCGGCCGTTATCCGCACGAACTCTCCGGAGGCCAACGCCAGCG
CGTCGCCATTGCGCGTGCGATCGCGAGACGCCCGCGATTCCTGATCGCGGACGAACCGGTTTCCGCGCTCGACGTGACGG
TCAGGGCGCAGGTCCTCGATCTCTTCTCGGATCTGCAGAAACGCTACGGCTTTTCGTGCCTGTTCATCAGTCACGACCTC
GGCGTCGTCGAACAGGTGGCCGACCGCGTCGTCGTCATGCAGGACGGCCGGATCATCGAGGAGGGTGACCGCGACACGAT
TTTCGACAGTCCGAAGGAAGCCTATACGCGCCGGCTTCTCTCGGCCATTCCCGCCCTCGACCAGAACGAAAAGGGCGGCG
TGACACTCAAATGGCGTCTGGAGAATTGA

Protein sequence :
MTMDKLLTVCGLSLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMK
ENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMR
QRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTE
DLLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSG
SGKTTLGRTIAGLVTESEGRIQFQGRPRTENWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTL
ETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDL
GVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPALDQNEKGGVTLKWRLEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-73 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-73 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-73 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-73 41