Gene Information

Name : ureC (SM11_chr2624)
Accession : YP_005721138.1
Strain : Sinorhizobium meliloti SM11
Genome accession: NC_017325
Putative virulence/resistance : Virulence
Product : urease alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2592184 - 2593896 bp
Length : 1713 bp
Strand : -
Note : Urea amidohydrolase (urease) alpha subunit

DNA sequence :
ATGTCCTACAGAATGTCGCGCGCGGCCTATGCCAACATGTTCGGTCCGACCGTGGGCGACAAGGTGCGCCTCGCCGACAC
CGAGCTCTTCATCGAGGTCGAGAAGGATTTCACCACGCATGGCGAGGAGGTGAAGTTCGGGGGCGGCAAGGTCATCCGTG
ACGGCATGGGCCAAAGCCAGGTGACGCGCGAAGGCGGCGCGGTCGACACGGTGATCACCAATGCGCTTATCCTCGATCAT
TGGGGGATCGTGAAGGCGGATATCGGGCTGAAGGACGGGCGGATCGCGGCAATAGGCAAGGCCGGCAATCCGGACATGCA
GCCGGGCGTCACCATTATCGTCGGCCCGGGCACGGAGGTCATCGCCGGCGAGGGCAAGATCGTCACGGCCGGGGGCATGG
ACAGCCATATACATTTCATCTGCCCGCAGCAGATCGAAGAGGCGTTGATGAGCGGCCTGACCTGCATGCTCGGCGGCGGG
ACGGGACCGGCGCACGGTACGCTCGCCACGACCTGCACGCCCGGACCGTGGCACATCGCCCGCATGATCGAAGCGGCCGA
TGCGTTTCCGATGAATCTCGCCTTTGCGGGCAAGGGAAATGCGTCGCTGCCCGGCGCGCTCGTGGAAATGGTACTCGGCG
GCGCGACCTCGCTGAAGCTGCACGAGGATTGGGGCACGACGCCGGCCGCCATCGACTGCTGCCTCTCCGTTGCCGACGAA
TACGACGTGCAGGTTATGATCCATACCGACACACTCAACGAAAGCGGCTTCGTCGAGGATACGATCGCGGCGATCAAGGG
CAGGACGATCCACGCCTACCACACGGAAGGCGCCGGCGGCGGGCATGCGCCTGATATCATCAGGATCTGCGGCCAGCCGA
ACGTCATCCCGTCCTCGACCAATCCGACGCGGCCCTATACGGTGAACACGCTTGCGGAACATCTCGACATGCTGATGGTA
TGCCATCACCTGTCGCCCACCATTCCGGAAGACATCGCCTTCGCCGAAAGCCGCATCCGCAAGGAGACGATCGCAGCGGA
GGATATCCTCCACGATATCGGCGCCTTCTCGATCATTTCCTCCGACAGCCAGGCGATGGGGCGGGTCGGCGAGGTGGCGA
TCCGCACCTGGCAGACCGCCGACAAGATGAAGCGCCAGCGCGGACGGCTCAAGGAGGAGACCGGCGACAACGACAATTTC
CGGGTCAAGCGCTACATCGCCAAATATACGATCAACCCGGCGATAGCCCATGGCCTCAGCCATGAGATCGGCTCGCTCGA
GGTCGGCAAGCGCGCCGATCTGGTCCTCTGGAATCCCGCCTTCTTCGGCGTGAAGCCCGACATGGTGCTTCTCGGCGGCA
CGATCGCCGCAGCACCCATGGGCGACCCGAACGCCTCCATCCCCACGCCGCAGCCGGTCCACTACCGGCCGATGTTCGGC
GCCTATGGAAGGAGCCGGACCAACTCCTCGGTCACCTTCGTCTCGCAGGCGTCGCTCGATGCCGGGCTCGCCGGCAGGCT
CGGCGTCGCCAAGGAGCTCGTCGCTGTCCAGAATACCCGCGGCGGCATCGGCAAGGCGTCGATGATCCACAACAGCCTGA
CGCCGCATATCGAGGTCGACCCGGAAACCTACGAGGTCCGCGCCGACGGCGAGCTCCTGACCTGCGAGCCGGCGACGGTG
CTGCCGATGGCGCAGCGGTATTTCCTGTTCTAG

Protein sequence :
MSYRMSRAAYANMFGPTVGDKVRLADTELFIEVEKDFTTHGEEVKFGGGKVIRDGMGQSQVTREGGAVDTVITNALILDH
WGIVKADIGLKDGRIAAIGKAGNPDMQPGVTIIVGPGTEVIAGEGKIVTAGGMDSHIHFICPQQIEEALMSGLTCMLGGG
TGPAHGTLATTCTPGPWHIARMIEAADAFPMNLAFAGKGNASLPGALVEMVLGGATSLKLHEDWGTTPAAIDCCLSVADE
YDVQVMIHTDTLNESGFVEDTIAAIKGRTIHAYHTEGAGGGHAPDIIRICGQPNVIPSSTNPTRPYTVNTLAEHLDMLMV
CHHLSPTIPEDIAFAESRIRKETIAAEDILHDIGAFSIISSDSQAMGRVGEVAIRTWQTADKMKRQRGRLKEETGDNDNF
RVKRYIAKYTINPAIAHGLSHEIGSLEVGKRADLVLWNPAFFGVKPDMVLLGGTIAAAPMGDPNASIPTPQPVHYRPMFG
AYGRSRTNSSVTFVSQASLDAGLAGRLGVAKELVAVQNTRGGIGKASMIHNSLTPHIEVDPETYEVRADGELLTCEPATV
LPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 0.0 70
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 0.0 70
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-161 62
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-163 62
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 4e-163 62
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-163 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_005721138.1 urease alpha subunit VFG0270 Protein 2e-164 63