|
Name : SM11_chr2573 (SM11_chr2573) Accession : YP_005721087.1 Strain : Sinorhizobium meliloti SM11 Genome accession: NC_017325 Putative virulence/resistance : Unknown Product : TRm23a transposase Function : - COG functional category : - COG ID : - EC number : - Position : 2542278 - 2543828 bp Length : 1551 bp Strand : + Note : Transposase and inactivated derivatives DNA sequence : ATGCCTGCGGAGAGACTGGAGATGCGGCGTGTCCGCGAGATATTGAGATATCGCTTCGAACAAGGACTTGGCCACAAGTC GATCGCGGTTCGGGTTGGAGCTGCGCCATCGACGGTGCGCGAGACGCTTCGGCGTGCGGCCATTGCGGAGCTATCGTGGC CGTTGGGTGACGACGTCAGCGATGCAGTCCTGGAAGCGGCGCTTTACAAGGCAGGCGGGACGAAGACGGGTCATCGTCGG AGCCCTGAGCCGGACTGGGCGCAGGTCCACCGCGAGCTGAAGCGCAAGCATATGACGCTGCAGATCCTTTGGGACGAATA CATCAGCCGTTATCCGGAGGGCTATCGCTACAGTCGCTTCTGTGACCTCTACCGCGGCTGGGCGATGAAGTTGCCTGTGA CGATGCGGCAGGATCACGCGGCCGGCGACAAGCTGTTCGTCGACTACGCCGGCGACACGGTCACGGTTGTCGTTGATCGG CTGTCCGGCAAGACACGGCAGGCGCACCTGTTCGTGGCGGTTCTGGGAGCATCCAGCCTTTCATATGCGCAGGCACGTTG GAGCGAGACGCTTCCCGACTGGATTGAATGCCATATCCTGGCGCTGGAGTACTTTGGCGGTGCGCCAGCCTTGCTGGTTC CCGACAATGCCAAGGTAGCGATCATCAAGGCCTGCCACTTCGATCCCCAGGTCAACCGGACGTATTGCGGGATGGCGGCC CATTATGGCAGCGCCGTCTTGCCGACGCGGCCGCGACGCCCGCGGGACAAGGCGAAAGTGGAAGCTGCGGTTCGTATCGT CGAACGCTGGCTATTGGGCCGGCTGCGCCATCGCATCTTCTATAGTTTGGCCGAGGTCAATGCGGCGATTGGCCAATTGC TCCATGATCTCAATGATAAGCGCGTTCTGCGCCGTGTCGGCGCCACGCGCCGCCAATTGTTCGAGGAGCTTGATCGTCCG GCTTTGCGACCGCTGCCTGTCGAACGTTATGTCTTTGCCGAATGGCGTATCCGGCGCGCCGGGCTGGATTATCACGTCGA GATCGAGCGGCACTATTATTCCGTTCCCTATCGCTTTGCCCGCGAGCAGGTCGAGGCTCGTATCACCGCCAATACGATCG AGATCTTCCACAAGGGCGAGCGAATTGCCGCTCACCGGCGCTCCAGCGGCAACGGCAAGCACACGACGATCCCCGATCAT ATGCCCTCTGCGCATCGCCGCTTTGCCGACTGGACGATTGAACGGATTCAACGCGAAGCCTCTGCGATGGGGCCGGATGT TGCGCTGTTGTGCGAGCGCATTCTTGCCGACAGGCCTCATCCCGAGCAGGGCTTTCGAGCTTGCCTCGGCATCATCCGCC TCAACAAGAGCTTCGGCCGCGACAGGGTCAATGCCGCTTGCGGCCGTGCGTTGGAGATTGGCGCACGAACCTATGGCTCG GTGCGATCCATCCTCGACAATCACCTTGACCGGACGGCTGCCTCAAATGGAGCGGCGCCGCATGAACCGATCCATCACGC CAACATCCGCGGACCTCGCTATTACCACTAA Protein sequence : MPAERLEMRRVREILRYRFEQGLGHKSIAVRVGAAPSTVRETLRRAAIAELSWPLGDDVSDAVLEAALYKAGGTKTGHRR SPEPDWAQVHRELKRKHMTLQILWDEYISRYPEGYRYSRFCDLYRGWAMKLPVTMRQDHAAGDKLFVDYAGDTVTVVVDR LSGKTRQAHLFVAVLGASSLSYAQARWSETLPDWIECHILALEYFGGAPALLVPDNAKVAIIKACHFDPQVNRTYCGMAA HYGSAVLPTRPRRPRDKAKVEAAVRIVERWLLGRLRHRIFYSLAEVNAAIGQLLHDLNDKRVLRRVGATRRQLFEELDRP ALRPLPVERYVFAEWRIRRAGLDYHVEIERHYYSVPYRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKHTTIPDH MPSAHRRFADWTIERIQREASAMGPDVALLCERILADRPHPEQGFRACLGIIRLNKSFGRDRVNAACGRALEIGARTYGS VRSILDNHLDRTAASNGAAPHEPIHHANIRGPRYYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 5e-109 | 44 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 7e-109 | 44 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 3e-109 | 44 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 1e-100 | 41 |
