Gene Information

Name : istB1 (SM11_chr0229)
Accession : YP_005718773.1
Strain : Sinorhizobium meliloti SM11
Genome accession: NC_017325
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 248744 - 249379 bp
Length : 636 bp
Strand : +
Note : DNA replication protein

DNA sequence :
ATGAGACCCAACGATCCTGTCGATACCGCGCGCCTGTCCCTGATGCTGACCGATCTGCGGTTGCCGGGCATCTCCAGGGC
CTGGCACACCTTCACCGAGCGGGCTGACACGGAAGGCTGGCCGGCTTCTCGGCTGCTGGCAGCGCTTGCTGAGTTCGAGG
TCGCCGAACGTGAAACGCGACGGATGCAGCGCCACCTCACCGAAGCGCGTCTTCCTCCAGGCAAAACCCTCGACACTTTC
GACTTCACGGCTGTGCCCATGGTCTCGGAGGCCCGGGTCATGGCATTGGTGGCGGGCGATGTCTGGTTGAAGAACGGCGC
CAATCTGATGCTGTTTGGCGGGCCAGGCGGCGGAAAATCGCATCTGGCGGCCGCCATCGGCGCCGGGCTGATCGAGAATG
GCTGGCGGGTTTTGTTCACCCGGACCACCGACCTTGTTCAGAAACTGCAAGCCGCCCGTCGCAATCTTGATCTCGAAGGG
GCCATCGCAAAGCTCGACAAGTACCGTCTGCTGGTGCTCGACGACATGGCGTATGTGAGCAAGGATCAGGCTGAAACCAG
TGTGCTCTTTGAGCTGATCAGGTGCGCGATACGAGCGCCGTTCGCTTCTCATCACCGCAAATCAGCCCTTCGGTGA

Protein sequence :
MRPNDPVDTARLSLMLTDLRLPGISRAWHTFTERADTEGWPASRLLAALAEFEVAERETRRMQRHLTEARLPPGKTLDTF
DFTAVPMVSEARVMALVAGDVWLKNGANLMLFGGPGGGKSHLAAAIGAGLIENGWRVLFTRTTDLVQKLQAARRNLDLEG
AIAKLDKYRLLVLDDMAYVSKDQAETSVLFELIRCAIRAPFASHHRKSALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3608 NP_755483.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-29 44
c5145 NP_756993.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-29 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB1 YP_005718773.1 transposase VFG1729 Protein 2e-29 44